Venturia canescens: 122414872
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Entry
122414872 CDS
T09386
Name
(RefSeq) E3 ubiquitin-protein ligase Smurf1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
vcan
Venturia canescens
Pathway
vcan04120
Ubiquitin mediated proteolysis
vcan04137
Mitophagy - animal
vcan04144
Endocytosis
vcan04341
Hedgehog signaling pathway - fly
vcan04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122414872
09130 Environmental Information Processing
09132 Signal transduction
04341 Hedgehog signaling pathway - fly
122414872
04350 TGF-beta signaling pathway
122414872
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122414872
04137 Mitophagy - animal
122414872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcan04131
]
122414872
04121 Ubiquitin system [BR:
vcan04121
]
122414872
03029 Mitochondrial biogenesis [BR:
vcan03029
]
122414872
Enzymes [BR:
vcan01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122414872
Membrane trafficking [BR:
vcan04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
122414872
Autophagy
Mitophagy
Other mitophagy associated proteins
122414872
Ubiquitin system [BR:
vcan04121
]
Ubiquitin ligases (E3)
HECT type E3
122414872
Mitochondrial biogenesis [BR:
vcan03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
122414872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
MUCL1
Motif
Other DBs
NCBI-GeneID:
122414872
NCBI-ProteinID:
XP_043282445
LinkDB
All DBs
Position
8:complement(22549797..22556813)
Genome browser
AA seq
924 aa
AA seq
DB search
MSNPGGSRRNGATKIRLTILCARNLARKDLFRLPDPFAKITVDGSGQCHSTDTCTATLDP
KWNQHYDLYIGKNDGITISVWNHRKIHKKQGGGFLGCVRIVCNTIQRLKDTGYQRLDLCK
AHTDDTDVVKGQIVVSLLSRDGHNGAVSNTVGHNAVVDVLGDLSCPTDLPDGWEERRTQS
GRLYYVNHCTKSTQWIRPNSRPTNPIIPTTPEHPAPPISEPTSPSGSGTPPTTRSDSPPH
RSQQDSWNIDGTPNRTPSRTPSRESSTHNTPRNTPTQQHQQIHGNQGKAPPLVGNSTATS
ASNALRERRAARNNDEQNANQTPNGRQNVGQPRRPGRTNRNRNGGLSERRNEAQQPSDLP
RGYEMRQTQQGQVYFYHVPSGASTWHDPRIPRDLPANELANELGPLPSGWEMRQTASGRV
YFVDHNNRTTQFTDPRLSSQIISNILKRQNNLSNGQSNQTNQSGVRSGEQMTLAESNSSF
MTNQTTTRTTNGSINSTTTTTTTTAATAATSATTTPSVVGQTIPSDLPKELMDSELLPKY
KRDLVAKLKCLRAELNALQPQSGHCRLEVTRNEIFEESYRLIMKMRPKDMRKRLMVKFRG
EEGLDYGGPAREWLYLLSHEMLNPQYGLFQYSRDDNYTLQINPDSGINPEHLSYFHFAGR
IIGIAVFHGHHIDGGFTTPFYKMLLNKAITLSDIEGVDPELHRSLTWMLENSIDGVLEAA
FAVEHSSFGVLRNHELKPGGKEIIVTEENKREYVKLYVNYRFMRGIEQQFLALQKGFHEL
IPPQLLRPFDERELELVIGGLGQIDINDWKLHTRLKHCTPETPVVKWFWQIVESYGEEMR
ARLLQFVTGSSRVPLQGFKALQGSTGSAGPRLFTIHAVDAPSENLPKAHTCFNRIDIPQS
YPNYQKMLDKLTQAVEETCGFAVE
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcccggcggtagcaggaggaacggggcgacaaagatccgtcttacgatcctg
tgcgcccgcaatctagccagaaaggatctgttccggctgcccgatccatttgccaaaatt
actgtagatggctctggtcagtgtcatagtaccgacacctgtacggccaccctcgatcct
aagtggaatcaacactacgatttatacattggtaaaaatgatggtatcacaatatcggta
tggaatcacagaaaaattcacaagaaacagggaggtggatttttgggatgcgtcaggata
gtttgcaacaccatacagaggctcaaagacacaggatatcagcgtctcgatctgtgcaaa
gctcacacggacgatacggacgtagtcaagggtcaaatcgtagtttcactcttatcgcga
gatggtcacaacggagctgttagcaacacggttggtcataacgccgttgtcgatgttctg
ggtgatcttagttgtccaactgatttacctgacggttgggaggagagaagaacccaaagc
ggtcgtctctattacgtaaatcattgcaccaagagtacacaatggatacgccctaattct
cgaccgacaaacccgataataccgacgacaccggaacatccggctcctccgatatcggaa
ccaacatcaccgagcggtagcgggacaccgccaacgacacgatcggacagtccgcctcac
agaagtcaacaggattcctggaacattgatggaaccccgaatagaaccccgagcagaaca
ccaagcagggaaagttcaacgcacaatacgccgaggaatacaccaactcagcagcatcaa
cagattcacggtaaccaagggaaagctcctccgctcgtcggaaactcgactgcaacatcg
gcgtcaaacgcattgagggaacgtcgcgcggcccgcaacaatgacgaacaaaacgcgaat
caaacgccaaacgggagacaaaatgtgggccagccgcgacggcccggtcgaacgaacaga
aatcgaaacggaggattatccgaaagacgtaacgaagcgcagcaaccttcggatttgcca
cgcggttacgagatgcgccagactcaacagggacaagtttatttctatcacgtgcccagt
ggagcatcaacctggcacgatccacgaataccgcgtgatttaccagcgaacgaattggca
aatgagctcggtccgttgccaagcggatgggaaatgcgacaaacggcaagtggtcgagtt
tatttcgtcgatcataataatcgaacgacacagtttacggacccacgattatcaagtcag
attattagcaatatattgaaaagacaaaacaacctgagcaacggacaatctaatcagacg
aatcagagtggcgtaagaagcggcgaacaaatgacgctcgcggaaagtaactcgtcattt
atgaccaatcagacaacaacgagaacaacaaacggtagtatcaatagcaccaccaccacc
accaccactaccgccgccaccgcagctacgagcgctactacgacgcccagcgtggtagga
caaacgataccctcggacctacccaaagaactcatggatagtgaattgttgccgaaatac
aaaagagatctcgtggctaaactaaaatgtttgagggccgagttgaacgctctgcaacca
cagagcggccattgccgtctcgaagtaaccagaaatgagatattcgaagaatcgtacagg
ctcatcatgaaaatgcgcccgaaagatatgaggaaacgtcttatggtgaaatttcgggga
gaggagggcctcgattacggtggaccggcgagagaatggctctatcttttatctcacgaa
atgttgaatccccagtatgggctctttcaatattctcgggacgacaattatacgttgcaa
ataaatccggattcaggaataaatccagaacatttgtcctactttcattttgccggtaga
atcattggtatcgctgtgtttcatggtcatcacattgacggaggtttcacaacgcctttt
tacaaaatgttgctcaataaagcaattactctgagcgatatcgaaggggttgatccggaa
ttgcacagaagtttaacgtggatgctcgaaaacagtatagacggtgtattggaggcggct
tttgcggttgagcatagtagctttggcgtgttgagaaatcacgagttgaaacccggaggc
aaagagatcatcgttactgaggagaacaaaagagaatacgtcaagttgtacgttaattat
cgatttatgcgaggcatcgagcaacaatttttggctcttcaaaaaggttttcacgaatta
ataccccctcaattattaagaccgtttgacgagcgcgaattggaactcgtaatcggtggg
cttggacaaatagatataaacgattggaagctccatacgaggcttaaacattgtactccg
gagacaccggttgtcaaatggttctggcaaatcgtcgagtcgtacggagaagaaatgaga
gcgagactattgcaatttgtcaccgggagctcaagggtgccgcttcaaggtttcaaagct
cttcagggatctacaggatccgcaggaccacgtctcttcacgattcacgcggtcgacgca
ccgagcgaaaatctacccaaagctcatacctgcttcaatagaatcgacataccccagagc
tatcctaattatcaaaagatgcttgacaagcttactcaagcggttgaagaaacttgtggc
ttcgcggttgaataa
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