Venturia canescens: 122414950
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Entry
122414950 CDS
T09386
Name
(RefSeq) transcription factor Sox-10-like
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcan03000
]
122414950
Transcription factors [BR:
vcan03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122414950
SSDB
Ortholog
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Sox_N
HMG_WDHD1
Bac_rhamnosid6H
MATalpha_HMGbox
Motif
Other DBs
NCBI-GeneID:
122414950
NCBI-ProteinID:
XP_043282585
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All DBs
Position
8:19794093..19803014
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AA seq
444 aa
AA seq
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MMSDIPLADSSGIIPSGMLPTSGAIADNSINNNNTTVVNNNKSSVGNPGSAGMEANGGEG
ISAAVAKVLQGYDWTLVPVATKNSSDKRAAHVKRPMNAFMVWAQAARRRLADQYPQLHNA
ELSKTLGKLWRLLSDNDKKPFVEEADRLRVIHKREHPDYKYQPRRRKQNGPGSARESSPS
RNQSNVSFSVSGSLKQEDTNSPRGNLLPNSPHSSRVSSSPPSTPTGNQGLSPPTPPTTPR
GQHFVAQHHQAQHHHQQNYHQQELSADDASVDCAHHHQHPGSGVDLRYIEVGEGLPGEEG
LPLSTLGNLSSIGLNLEIESSELDQYLPAQVMHPVHHHQYHVGTGSATVGHQWIAASRFD
EETERPSKRHCAETGATTMLETWEERPQETARYHDLQPLPPVQYISTQHQSHGGSQINGH
SHVSSSYAPYHRYLTGIDTWSSYM
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcgacattccattggcggactcctcgggaataattccatcgggaatgctcccg
acgagcggagcgatcgccgacaatagcataaacaataacaacacgacggttgtcaacaac
aacaaaagcagcgtggggaatccgggctcagcggggatggaggcgaacggtggcgaaggg
atcagtgcagccgtcgccaaagttctgcagggatacgattggacgctggttcccgttgcc
acgaaaaactccagcgacaagagagccgcacacgtgaaaaggccgatgaacgcgttcatg
gtttgggctcaagctgccaggagaagactcgccgaccagtatccccagctccacaacgcc
gagctctcgaaaaccctcggaaaactgtggcgacttctttcggacaacgacaaaaagcca
ttcgtcgaagaggcggacagacttcgggtgattcacaaacgtgagcaccccgattacaag
taccagccgcggaggagaaaacaaaacgggcctgggagcgctcgcgagagttcgccctcc
cggaaccagagcaacgtctccttcagcgtttccggctccctcaaacaggaagatacgaac
agtccgcgcggcaaccttttgcccaactcgccgcacagcagcagagtcagctcctcgccg
ccgagcactccgaccgggaaccaaggactgtcgcctcccacgccgccgacgacgccgagg
ggccagcacttcgtggcccagcaccaccaggcgcagcatcatcaccagcagaattatcac
caacaggaactctcggcggacgacgcctcggtcgactgcgctcaccatcatcagcaccca
ggctccggtgtggatctccggtacatcgaggtcggagaaggcctcccaggggaggagggt
ctacctttaagcacgttaggcaatctcagctcgatcggtctcaacctcgagatcgagagc
agcgaattggatcagtatctacccgcccaggtaatgcatcctgtgcatcatcatcagtat
cacgttggaacggggagcgcaaccgtcggccatcagtggatcgcagcgtcgcgatttgac
gaagaaacagagagaccgagcaagcgccactgcgcggaaacgggcgcgacgacgatgctg
gagacgtgggaagagaggccgcaagaaacggcgcgataccacgacctccagcccctcccg
ccggtccagtacatctcgacgcagcatcagtctcacggaggatctcagataaacggacat
tcgcacgtttcctcgtcgtacgcaccgtaccatcggtacttgactggtatcgacacttgg
tcgagttacatgtga
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