KEGG   Venturia canescens: 122415122
Entry
122415122         CDS       T09386                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
vcan  Venturia canescens
Pathway
vcan03030  DNA replication
vcan03410  Base excision repair
vcan03420  Nucleotide excision repair
vcan03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vcan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122415122
   03410 Base excision repair
    122415122
   03420 Nucleotide excision repair
    122415122
   03430 Mismatch repair
    122415122
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcan03032]
    122415122
   03036 Chromosome and associated proteins [BR:vcan03036]
    122415122
   03400 DNA repair and recombination proteins [BR:vcan03400]
    122415122
DNA replication proteins [BR:vcan03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    122415122
  DNA Replication Termination Factors
   ELG1-RFC complex
    122415122
Chromosome and associated proteins [BR:vcan03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    122415122
DNA repair and recombination proteins [BR:vcan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     122415122
  Check point factors
   HRAD17(Rad24)-RFC complex
    122415122
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA AAA_11 AAA_16 Rep_fac_C AAA_22 NPHP3_N Viral_helicase1 AAA_30 RuvB_N nSTAND3 FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 122415122
NCBI-ProteinID: XP_043282927
LinkDB
Position
8:20660447..20662492
AA seq 355 aa
MSLWVDKYRPTSLSKLDYHLEQAKDLKNMVQKGDFPHLLVHGPPGAGKKTRIMSIIRELY
GSGVERLRMENMQFETPSKKKLQIMTISSNFHIEINPSDVGIYDRVVIMDLIKTTAQTYQ
IDPSGQRDFKVVILTNVDQLTRDAQHALRRTMEKYVTSCRLILCANTTSRVSPAIRSRCL
GVRIAAPTFVEIESILRHICKREGLNLPDELATRLSRTSGRNLRRAILMLEACKVEQYPF
TAEQEITEPDWQVYIRKTASIMVAEQTPKKILEVRNRLYELLTHAIPCDVIFRGLVQELA
KNCDLEMKGEIAEMAAEYEHRMHRGSKVIFHLEAFVARFMALYKEYMASAVGDEF
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgagtttgtgggtcgacaaatatcggccaacaagcctgagcaagctcgattatcatctc
gaacaggcaaaagatttaaaaaatatggttcagaaaggagattttccacatctgctggta
cacggtccaccaggcgctgggaagaaaaccagaataatgagtatcattagagaactttac
ggcagcggagtggagagactccgaatggaaaatatgcaattcgagacaccatctaaaaaa
aaactgcagatcatgacgattagcagcaactttcatatcgaaattaatcccagtgacgtt
ggaatttatgacagagtcgtcattatggatttaataaaaactaccgctcaaacttatcag
atagatcccagtggtcagcgggactttaaagtggtaattctaacgaacgtggatcaatta
acgagggacgctcagcacgcgcttcgccgtacaatggaaaagtatgtgacgtcgtgtcgt
ttaattttgtgtgctaacacaacttctcgcgtttcaccagcgataagatcgcgttgtctt
ggggttcgaatcgccgcgccgaccttcgtagaaattgaaagtatattgcgccatatatgc
aaacgagagggcctcaatttgccggacgaattggctacgaggctgtcgcgaaccagtgga
agaaatctcagaagagctattttgatgctcgaggcgtgtaaagtcgaacagtatcctttc
acagctgagcaagaaatcacagagccagattggcaagtatacataagaaaaacggcctcg
ataatggtagcggagcaaactccgaaaaaaattctcgaggttcgaaacaggctttacgag
ttgttgacacacgcgataccctgtgacgtaatatttcggggcttggtacaagagttggcg
aaaaattgtgatcttgaaatgaagggtgaaattgcggagatggcggcggaatacgagcac
cgtatgcatcggggctctaaagtaatatttcatctggaagctttcgtcgctcgttttatg
gctttgtacaaggaatacatggcgtcagcggtcggcgatgaattttga

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