Venturia canescens: 122415299
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Entry
122415299 CDS
T09386
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71 isoform X1
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcan03019
]
122415299
04121 Ubiquitin system [BR:
vcan04121
]
122415299
Enzymes [BR:
vcan01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122415299
Messenger RNA biogenesis [BR:
vcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122415299
Ubiquitin system [BR:
vcan04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122415299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
DUF5128
SGL
potato_inhibit
zf-B_box
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
122415299
NCBI-ProteinID:
XP_043283225
LinkDB
All DBs
Position
1:37308237..37318678
Genome browser
AA seq
744 aa
AA seq
DB search
MSNTHENVYNRGTSPFGDFNMHRRDPTANFNICLAHPANNRASVLSPWERMNSGYSSASP
PGTTSSCSSANSYSYGSPPEDDLSVDSLFSSLLQAVNSRNFGSNCDVTNPSGESFNVSKC
AVDCIDPLCDNCISVRQNRGDVNHFIEHFGSLQRGAFEISNSPPPSGAVASMLQPIGTPS
SSGSPISSPRKYLCEIHHETQALWCLTCSRTFCGECCMNLHHSHVTMLLMEALEGAGVQA
HKVMSEARVGINSLREDLEAVQMAAETLEQKAREASSDVMLCVRRVASALESREKELLGR
IEKARVAKFASLKIRDEGLRNGIVRLSKVVDKLGAVMDASTIATNPLDLLVTKDMASAEV
FLQVFQIYQNRQNLPPTEENWISFSGPEGNVLQAIANFGSIMVNNPGPIGDRRAVRGRGG
SPQQNLCQNVQVAPRSPVPRGRPIALNSFPVTVRNGRNVPPLHKSVKVIGTNADPQENLC
RPWGVACDKDGHIIVADRSNNRIKIYREDGSLVKQFGSHGSGPGQFDRPAGITVDARKRI
IVADKDNHRIQILTMEGLFLQTFGEKGCRCGQFNYPWDVAANTECQIVVSDTRNHRVQLF
SAEGVFLRKYGYETTPSMWKHFDSPRGVAFNPEGNVVTTDFNNHRVVVIDSDFFNAKVLD
CDTTGGVKQFLRPQGVIIDDEGNLVVADSRNHRIQVFDSAGALKWKFGTHGNGPQEMDRP
SGIALTPSGKIAVVDFGNNRVLLI
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatactcacgaaaacgtctacaatcgtggtacaagtcctttcggggatttcaac
atgcatcggcgcgatccaaccgccaatttcaacatatgcctagcccatccagctaacaac
cgcgcaagcgttttatcaccgtgggagagaatgaattcggggtattcgagtgccagtcca
cctggcacgacgtcctcgtgcagcagcgcaaattcgtacagttacggtagtccaccggag
gatgacctcagtgtcgattctcttttcagcagtcttctgcaggccgttaacagcagaaac
tttggttcgaattgcgacgtgacgaatccatcgggcgaaagttttaacgtttcaaaatgt
gccgtcgactgcatcgatccactctgcgacaactgcatcagtgttcgccagaatcgtggg
gacgtgaaccattttatcgagcattttggatcgttgcaacgaggtgcgttcgaaatatcg
aatagtccacccccctcaggagcagtagcatcgatgttacaaccgatcggtactccatcg
tcgtcgggttcgccaatttcttcaccccgaaagtacttgtgcgagattcatcatgagaca
caagctctatggtgcctgacttgcagtcgtacattttgcggggaatgttgcatgaatctt
catcacagtcacgtgacgatgcttctaatggaagcgctcgaaggagccggtgtacaagcg
cacaaagtgatgagcgaagcaagagtcgggattaattcactccgcgaggacctcgaggct
gtacaaatggctgcggagaccctcgagcaaaaagcaagagaagcttcctcggacgtcatg
ctttgcgtcagacgcgttgcttccgctcttgaatcacgagagaaagaattgttgggcaga
atcgagaaagcaagggtcgccaaattcgcttccctcaagattagagacgagggcttgaga
aacggaattgtcagactttccaaagtggttgataaactcggagcagtcatggacgcgtcg
accatcgctacaaacccgttggatcttctagtcaccaaagacatggcttcggcggaggtt
ttccttcaggtatttcagatttatcaaaatcgacagaatcttccgccaacggaggaaaac
tggatttccttttcgggaccggaagggaatgtgttgcaggcgatcgcgaattttggctca
ataatggtaaacaatccaggaccgatcggtgatcggcgcgctgtcagaggtcgggggggt
tcgccacagcaaaatttatgccaaaacgttcaggtcgcgccgcgcagccccgtaccccgt
gggcgaccaatcgcgctaaatagctttcccgtaacggtcagaaacggaagaaacgtaccc
ccgttgcacaaatccgtcaaggtaatcggcaccaatgccgaccctcaagagaacctttgc
cgaccttggggagtcgcttgcgacaaagacggtcacattatcgtcgccgacagatcgaac
aatcggataaaaatttatcgggaggacggtagcctcgtcaaacaatttggatctcacggc
agtggacccggacaattcgacagaccggctggaattaccgtcgatgctagaaaacgaatt
atcgttgctgacaaagataatcaccgaattcaaatactcacgatggagggactgttcctg
caaacattcggggagaaaggctgtcgctgcgggcaattcaattatccatgggacgtcgcc
gcaaatacagagtgccaaatagtcgtctcggacacgcgcaatcaccgggttcaattgttc
agcgctgagggagtattcctgagaaaatatggatacgagacgacgcccagcatgtggaag
cactttgattccccgcgaggggtagctttcaatccagagggtaatgtcgttacaacggac
ttcaacaatcatcgcgtcgtcgtaatcgattccgactttttcaacgcaaaggtactcgac
tgcgatactaccgggggtgttaaacaatttttgaggccacagggagtgataattgacgac
gaaggtaatttagtcgtagccgattcgcgaaatcacagaattcaagtattcgactcggct
ggcgcgttaaaatggaaattcggcactcatggtaacgggcctcaagagatggacaggccg
tccggtatcgccttgactccaagcggaaaaatagcggtcgtcgatttcggcaataaccgc
gttttgttgatttaa
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