Venturia canescens: 122415413
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Entry
122415413 CDS
T09386
Name
(RefSeq) host cell factor isoform X1
KO
K14966
host cell factor 1
Organism
vcan
Venturia canescens
Pathway
vcan03083
Polycomb repressive complex
vcan04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122415413
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
122415413
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vcan01009
]
122415413
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcan03036
]
122415413
03029 Mitochondrial biogenesis [BR:
vcan03029
]
122415413
Protein phosphatases and associated proteins [BR:
vcan01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122415413
Chromosome and associated proteins [BR:
vcan03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
122415413
HMT complexes
COMPASS/SET1 complex
122415413
MLL-HCF complex
122415413
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
122415413
Mitochondrial biogenesis [BR:
vcan03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
122415413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
122415413
NCBI-ProteinID:
XP_043283465
EnsemblRapid:
LOC122415413
LinkDB
All DBs
Position
8:complement(18938663..18950136)
Genome browser
AA seq
1589 aa
AA seq
DB search
MAAPMLKWKRITNPTGPQPRPRHGHRAVAIKDLMVVFGGGNEGIVDELHVYNTATNQWFV
PLTKGDIPPGCAAYGFVVDGTRILVFGGMVEYGKYSNELYELQASRWEWKRLKPKHPKHE
QPPCPRLGHSFTLIGNKVFLFGGLANDSEDPKNNIPRYLNDLYTLELLPNGATAWEVPQT
HGHAPPPRESHTGVAYTDRVTGKSCLVIYGGMSGSRLGDLWFLDVDSMTWNKPIVHGPTP
LPRSLHTATLIGHRMYVFGGWVPLVVDDVKVATHEKEWKCTSTLACLNLETLTWEQLTVD
SLEENVPRARAGHCAVGVHSRLYVWSGRDGYRKAWNNQVCCKDLWYLEVSKPPAPSRVQL
VRASTHSLEVSWTATPSAQYYILQIQKYDMPPATSAFPVAAPPPTTTPALTPATPPTIPV
CSPPVTTAAATPMIPAVVTPVRPTVPQAAPIRVQTPVQMPPVSKPISSPVVAKPASPMTP
RGNLIRIRSPLVTSASIVASPVPASTIAATTIEQPTVVNPATTVSQSPSAMSGIAALAAA
AAATPKISMNNIPMISQAGTNTIRMKSVQPGQQIRFAAPGATVLRTASPQQSKQIILQKP
GQNITGQPQIVHLVKTTQGMMATVPKMSLIPGKNVQGAGGKAPNQGPTILRLVNPNTVAG
LKTLTTVKTSGLVAMSKGQSIAGKQTIMITKPGGNGGLVGRTNQIIVVTTGSGLRAVQAV
TTSQAGAGQAGNLTTPVNVLPLSAANHVTNQQGVKMIVVSSGAMVGGTSGKPITITVPGQ
GGVPKTVTIATKGGQQTIFNPGKSQIVTMPQIQKGQDPLAAGKPVTLQMSGGLGAKTVTL
MPTSSSIVTTSADSIDTTKMMFVPQKQPSASLASTSDGPATTDAALAALAAEAGLIDPVQ
EPSGGLSFMVADDVAGDEKTDDSCNGNEASVTAALVSQLTAGEPMQVDGEGNFVIPQVDG
PCDLLSSDDEDAGAPETTTQSEAALESLNEDSQEMEQDPAPVASTEEPQESSTDPTDEPE
PPKPSESEETQAPKIEEASSQETAESEPATQPETQSSEITTESTSEPEPPSEGDMQIISD
PPSADNSVKSEATQPVVDPIAERMAEIVTKDEKSEEKSDGEENQSNTIVAADLPPLHEKS
DAEALLDALEDQTFEPADEEMPAEKDNIKKENSPGALPPESIKLEAPEPMITEPSPPIVP
QATITPIIAPPTTNAPKIPSIPVAPPTTVPTVIPTLLSPRQIKSDPRDEPMEDDKPLDES
MSSVTNGNSNADQELEALHKAIQREAKDDLPIKKEPLKQEKENEPRPEAGDDSTALTTLA
TAALGSAEQPVKVKTELTDDEKKDIDWYDVGVIKGTTCTVQHYYLPGDEPLDMSQAPGDI
FKGRTKIPLESGTAYKFRVAAVNSCGQSAWSEVSAFKTCLPGFPGAPSAIKISKSAEGAQ
LSWEPPPSHLGPILEYSVYLAVRSASAVPNSTGEATTVATTPTQLAFIRVYCGPTNACSV
PNSSLSAAHMDVTTKPAIIFRIAARNDKGYGPATQVRWLQDPTTAVKSNPQVKRPVNDAR
SQANSPQKRVKPEMAGDNFSCETSLSDPS
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacccatgttaaagtggaaacggatcacaaatccaaccgggccccagccaaga
ccccgtcatggacacagggcagtcgccattaaagatctcatggtcgtttttggcggtggc
aacgagggtatagttgatgagctacatgtttataatacagcgacgaaccaatggtttgtc
ccgttaacaaagggcgacataccgcccggctgcgcagcctatggctttgtggtggatggt
acgaggatcctggtgttcgggggtatggttgagtatggaaagtactcgaatgagttatac
gagctccaagcgagtcgttgggaatggaagagattgaagccgaagcatcccaagcacgag
cagcctccttgtccgagactcggtcacagtttcacgctgatcggaaacaaagttttcctg
tttggtggactcgccaatgacagcgaagatcctaagaacaatataccgaggtacttaaat
gatttgtacaccctggaattattgccaaatggtgcaaccgcttgggaagtgccacaaacg
cacggtcacgcgcctccgccgcgagaatcccacaccggagtcgcctacaccgatcgtgtc
actggaaaatcatgccttgttatttacggcggtatgagcggcagtcgtctcggggatctc
tggtttctcgatgtcgattccatgacatggaacaaaccgattgttcatggccctacacct
ttgccacgctcgctccataccgccactctcatcggtcatcgtatgtatgtctttggagga
tgggtccctctcgtcgtcgatgatgtcaaggtcgcgacccacgagaaagagtggaaatgt
acgagcactctggcatgcttgaatttagaaacactgacttgggaacagttgacggtagat
tctctggaagagaacgtaccgcgagcacgtgcgggtcactgcgcggtaggagtgcacagt
agattgtacgtgtggtcgggtcgagatggttatcgcaaagcatggaacaaccaggtatgt
tgcaaagatttgtggtatctagaggtgagtaagcctccggcgccgtcgagggtgcagctg
gtgcgagcgtcgacgcattcgttggaggtcagctggactgcgacgccctcggctcagtac
tatattctgcaaatacaaaaatacgacatgccaccggcaacgagtgcgttcccggtagcg
gccccgccgccgacgaccacgccagcgttgacgccggcaacgccgccgacgattccggta
tgttcaccgccggtgacaacggcagcggcaactccgatgatcccagcggttgtgacaccg
gtgcgtcctacggttcctcaagctgcgccgattcgcgtgcaaacgccggtccaaatgccg
ccggtatctaagccgatttcgtcgcctgtagtcgctaagcccgcgagccccatgacaccc
cgagggaatctcataagaatccgttcgcctctggtaacatcagcctcgatcgttgcttcg
ccagtaccggcgtcgacaatcgctgctactacgatcgagcagccgacagttgtaaacccc
gcgacgaccgtcagccaatcaccatccgcgatgtccggcatcgctgcacttgctgcggcc
gctgcagccactccgaagatcagtatgaataacataccgatgatttcacaagccggaacg
aacaccataagaatgaagagcgtgcagccgggccagcagattcgtttcgctgcgcctggg
gcaacggttctacgaaccgcatctccgcaacagagtaaacaaataattctgcagaaaccc
ggacaaaatataactggacagccgcagatagttcatttggttaaaacgacccaaggcatg
atggctacggtgcctaaaatgagcttgattcctggaaaaaatgttcaaggcgctggaggc
aaagctcccaaccaaggaccgacgattttacgactcgttaatccgaacacagttgccgga
cttaaaactttgaccaccgttaaaacttcagggctcgtggcgatgagcaaaggtcaaagt
atagctggaaaacaaacaattatgatcacgaaacccggaggcaacgggggacttgtcggt
cggacgaatcaaataatcgttgtaactacgggctcgggtttacgagccgttcaggctgtc
actacgtcacaggccggcgccggacaagctggaaatcttacgactccggttaacgttctt
cccctatcggcagccaatcacgtgacgaatcagcaaggtgtgaagatgatcgtcgtctcc
tcgggtgctatggtgggtggaacttccggtaaaccgattacaatcacggttccgggtcag
ggcggcgtaccgaagacggttacgatcgcgactaaaggcggacagcagacgatcttcaat
cctggaaaaagtcaaatcgtcacgatgcctcagatacagaaaggacaagaccctctagca
gccggaaaacctgttaccctccaaatgtccggaggcttgggagctaaaaccgtgactctg
atgccaacgagcagttcgatcgtcacgacctccgcggattcgatcgacacgaccaaaatg
atgttcgttccacaaaaacagccttcagcttcgttagcctcgacctccgatggcccagca
acgacggatgctgctctcgccgctttggctgccgaagctggcctcatcgatcccgtccaa
gagccttcgggcggtttgtctttcatggtcgctgacgacgtagctggtgacgaaaaaact
gacgacagttgtaacggcaacgaagcctcggtgaccgccgccctcgtctcacaattgacg
gccggagagccgatgcaagtcgacggcgaagggaactttgtcattccccaggtcgacggc
ccttgtgatttgctttcctccgacgacgaggacgccggggctcccgaaacgaccacgcaa
tcggaggctgctctggaatctcttaacgaagattcccaagagatggagcaagatcccgcg
cctgtcgcgagcacggaagagccgcaagagtcttcgacagaccccaccgacgagcccgag
ccaccaaagccttcggaaagcgaagaaacccaagcaccgaagatcgaagaggcctcgagt
caagaaaccgcggaatcggagcctgccacgcaaccagaaacgcaatcgagcgaaatcacg
acggaaagtaccagcgaaccggagcccccgagcgaaggcgacatgcaaatcatcagcgat
ccgccgtcggctgataattccgtcaaatcggaagctactcagccggtcgttgatccgata
gccgaaaggatggcagaaatagtgacgaaggacgagaaatccgaggagaaatccgacggt
gaagaaaaccagagtaatacgatcgtcgctgcggacctgcctcctctccacgagaaatcc
gacgccgaagctctcctcgacgccctcgaggatcagactttcgaacctgccgacgaggaa
atgccggctgaaaaagacaatattaaaaaagaaaattcacccggggctctccctcccgag
tccattaaactcgaagcccccgagccaatgatcactgaaccatcgccaccaatcgtccca
caagcaaccatcacaccaatcattgctccaccaacgaccaacgcaccgaaaattccttcg
attcctgttgcgcccccaaccacagtccccactgtaatccctactttgttgtcaccgaga
cagattaaatctgatccccgagacgagcccatggaggatgataaacctctcgacgaatcc
atgtcctccgttacaaatggcaattctaacgctgatcaagaattggaagcgttgcacaaa
gctatacaacgggaagctaaagatgatcttccaatcaaaaaggaaccgctcaagcaagaa
aaggaaaacgaaccgcgccccgaagccggtgatgattcaaccgctttgactactcttgct
accgcggccctcggctcagccgaacaacccgtcaaagtcaaaaccgagctcaccgacgac
gagaaaaaagatatagattggtacgacgtcggcgtaataaaaggcacgacgtgtacggtt
caacattactatcttcctggtgacgagccactcgacatgtctcaagctcccggagatata
ttcaagggcagaacaaagattcctctggaatctggaacagcctacaaatttagggttgca
gctgtaaatagttgtggtcaaagtgcatggagcgaggtatccgcattcaaaacgtgtctg
ccaggattcccgggcgctccgagcgcaataaaaatatcaaagtctgcggaaggggcccaa
ttgtcttgggaaccaccgccaagtcatttgggtccaattctcgagtactccgtctatctc
gcggttcgtagcgcgagtgctgttcccaacagcaccggcgaagcgacgacagtcgcaacg
accccgactcagttagccttcatcagggtttactgcggtcctactaatgcctgctccgtg
cccaatagttcactcagcgctgcgcatatggacgtcactactaaacccgctatcattttt
agaatagcagcacgtaacgacaaaggatatggaccagccactcaagtcaggtggttacaa
gatccaacgacagcagtgaaaagtaatcctcaagttaagcgaccagtaaacgacgcccgc
tcgcaggcaaactcccctcaaaaaagagttaagcccgaaatggcaggtgacaatttttca
tgtgaaacgtcattgagtgatccctcgtaa
DBGET
integrated database retrieval system