Venturia canescens: 122415608 Help Entry 122415608         CDS       T09386                                  Name (RefSeq) symplekin   KO K06100   symplekin Organism vcan  Venturia canescens Pathway vcan03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:vcan00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     122415608  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:vcan03021]     122415608    03019 Messenger RNA biogenesis [BR:vcan03019]     122415608 Transcription machinery [BR:vcan03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      122415608 Messenger RNA biogenesis [BR:vcan03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      122415608     U7-dependent histone pre-mRNA processing factors      122415608 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N Motif Other DBs NCBI-GeneID:  122415608 NCBI-ProteinID:  XP_043283816 LinkDB All DBs Position 9:complement(20600474..20605231) Genome browser AA seq 1130 aa AA seqDB search MDPRLHRRSDMEDDEPITDETSNFTTVNSVSPNSQIVEWINECSVNPIEAIKLTNLAKIQ EVLVNKETHLLGELLGEVLQFSLDRSAEVRKFITGFIEDTGVKQPETIPGMVQTLSRLVA DDAPVVAKRALRASGRIIRSALKWIASVPLVTTEMETSWTQLSNLKVQIINMIDSDNDGI RTQAVKFLEGVVLLQTYPDADTPKKPDDFSLEDVPLTLKIARRRKLEEEANHVMNLLVKF HGSPHVSSLNLMTCMGSLALIAKMRPQFMPSVIQALQKLQNDLPPTLSDSQVTSVQKHLK LTLLGLMKHPASIEFASSIAKQLTQLGAKEQDILKAYPKPEDIRRLKKRQQEQAAATAAK RAKLETIVPVEDPEPLPTPVPPPKPPELIELSENFIAERLSVEIASELVMDSMAWVPDTM TSIFAREYQPTATADINVQRQIISKLLAAQIKQAKAKKTKKDAKEDDALMEDLIQNPSIT VAEAKRERKREKDREKEKEAKASLEAHEKSLVKARNRLKALKLSEITKPLARETKEKMLL MAVNRILRAEKSAVYGGVAMVRSKILTTLAATFNPYIKEAVLRYITDDMRTRLDLAMGWL YEEYALLQGFQRRTTLCKKPREAPHQAYNFLLCTLVSAIDLIQGKDRDPLLSRLYLEAPL ITEDAVEALKALSSDDVRGFAPLQLLREMVVRRPTKQLIFLNVLLCHTGHEIAAIREAAI ELVVQLYARNDLSKLIEEYAVLYLGFLRQPKPPEIVFGQDRGRPQVEEVWSESTTRACLG LYLALLPEHQDLIHELARVYTSMGADVKRIVLRLVEAPVRSLGMASPQLLALVENCPKGA ETLVTRIIHILTDKSPPSAELVSRVRELYQTRVSDVRFLIPVLNGLTKKEVTAALPKLIK LNPIVVKEVFNRLLGNHNNEANVGPHTSPLTPAELLIALHNIDSTKAELKTVIKATSLCF ADKHAFTQETLAVVMQHLMDLTPLPTLFMRTVIQSLALYPRLSGFVMNILQRLILKQVWK QPKVWEGFVKCCERTQPQSFQVILQLPTTQLADALKMAPGLKAPLLAHIDSFAENQKAHI SQSIMDVIQGKLPIDMHDDFDIAPAGDYPLETKMETMDAEIAEPAPPGLD NT seq 3393 nt NT seq  +upstreamnt  +downstreamnt atggatcctcggttacatcggagatcggatatggaagatgatgaaccgataaccgatgaa acttccaatttcacaactgtcaattccgtttcgccaaactctcaaatagtggaatggatc aacgaatgctccgtcaatcccatcgaagcgataaagcttacaaatcttgcaaagattcaa gaagtcctagtgaacaaagaaacacatttgttgggcgaactccttggagaagtgctacaa ttttcattggacagaagtgcagaagtcaggaaatttataactggttttatcgaagacacc ggagtcaagcagccggaaacaataccaggaatggtacagaccctttcgagattagtagcg gatgatgctcctgttgtagcaaaaagggctttgagagcaagcggcagaataataagatca gctttaaaatggatagccagtgttcctctagtaactacagagatggaaacatcatggacg caacttagcaatctcaaagtacaaataataaacatgatagacagcgataatgatggcata cgaacgcaggctgtcaaatttttggaaggtgttgttctccttcaaacttatccggatgct gacacacccaaaaaacctgatgatttttctctcgaggatgttccgctcaccctgaaaata gcaagacgtagaaaactcgaggaagaggctaatcacgttatgaatttgttggtcaaattt cacggttcgcctcacgtgagcagtctcaatttgatgacttgtatgggatcgttggcgcta atcgctaaaatgagaccgcagtttatgccgtctgtcattcaagctcttcaaaaactacaa aatgatttgccaccaaccttgtccgattctcaagtgacaagcgtccaaaagcatttaaaa ttgacgctactgggtttgatgaaacatccagcaagcatagaatttgcctcgtcgatagca aaacaattgactcaacttggagccaaagaacaagatattctcaaggcttatccgaaaccc gaggatattcgtcgcttgaagaaacgtcagcaggaacaggctgctgcaactgctgcgaaa agagcgaaactcgagaccatcgttcctgtcgaagatcccgagcctttgccgactccggtt cctccaccaaaacctccggaattgatcgaactctcggagaatttcattgcagaaagatta agtgttgagatcgcctccgagctcgttatggatagtatggcctgggttccggatacaatg acttcgatattcgctcgtgaatatcagccaaccgcaacagcggatataaacgtgcaacgc cagatcataagtaaattattagcggcacaaataaaacaagcgaaagcgaaaaaaacgaaa aaagacgcgaaagaggacgacgctttgatggaggatttgatacaaaatccaagtatcaca gtggcggaggcgaagcgagaacgaaaacgtgagaaagatcgtgaaaaggagaaggaggcc aaggcttcattagaggcacacgagaaatcattggtgaaggcgagaaatcgtttgaaagcg ttgaaattatcggaaataacaaagccgttggcccgtgagacaaaagagaaaatgttgttg atggcggtaaataggatacttcgagctgaaaaaagcgcagtttacggtggagtcgcgatg gtgagatcaaaaattttaacgacactcgcggcaacattcaacccctacatcaaagaagcc gtattgcgttatatcacggatgacatgagaacccgtttggatttagctatgggttggttg tacgaagaatacgctttgcttcaaggttttcaaagaagaacaacactctgcaagaaacct cgtgaagctccccatcaagcatataattttttactttgcactcttgtctcggcgattgat ctgatccagggtaaggatcgtgatcctcttttgtcacgactttatctcgaagctccgctc atcacggaggatgcggtagaagccttgaaggctttgtcatccgatgatgttcgcggtttt gctccgctgcaacttctcagagaaatggtcgtgcgaaggcctacaaaacaattgattttt ttgaatgttttgctttgtcacaccggacacgagatcgctgcgataagggaggctgcgatt gagctcgttgttcaactttatgcccgtaacgatcttagtaaactcattgaagaatacgct gttctttatttgggattcttgagacagccgaaaccaccagaaatcgtgtttggtcaggac cgtggacggccgcaggtcgaggaggtctggagtgaatcgacgacccgggcttgcttggga ttgtatttggctctattacccgaacatcaggatcttattcacgaattggctagagtttac acttccatgggtgctgatgtgaaacgaatcgttctcaggctcgtcgaagctccggtcaga tctctaggcatggccagcccccaattgctcgccctcgtcgagaattgtcccaaaggtgcc gaaacactcgtcaccaggatcattcatattctcactgacaaatcgcctccgagtgccgaa ttggtctccagagttcgagaactctatcaaactcgcgtttccgacgttagattccttatt cctgtactgaatggcttaaccaagaaagaggtcactgctgctctacccaaactcatcaaa ctcaatcccatagtcgttaaggaggtgttcaatcggttactcggtaatcataacaacgag gcgaatgttggccctcatacttcgccgctcactcctgctgagctgctcatagctcttcat aacattgactcgaccaaagctgaattgaagactgttatcaaagcaacgtctctttgtttt gccgacaaacatgcatttacacaagaaactttggcggttgtgatgcagcatttgatggat ttgacgccgttgccaacgttatttatgcgaaccgttatacagagtttagccctttatccg cgtctgagtggtttcgttatgaatatactgcaacgtttgattctcaagcaggtgtggaaa caaccaaaagtttgggagggtttcgtcaagtgttgcgaacgaacgcaaccgcaaagtttt caggtgatacttcaattaccgacaacccaattagcagatgccttgaaaatggctccaggt ttgaaagcaccgttgttggcgcatatcgattcattcgctgaaaatcaaaaggctcacatt tcccaatcaataatggacgtgattcaaggaaaacttccgatcgacatgcacgacgatttt gatattgccccagccggcgattatcctttggaaacaaagatggaaacaatggacgccgaa attgcggagcctgccccgccaggtttagattga

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