Venturia canescens: 122415629
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Entry
122415629 CDS
T09386
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vcan01009
]
122415629
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcan03019
]
122415629
Protein phosphatases and associated proteins [BR:
vcan01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122415629
Messenger RNA biogenesis [BR:
vcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122415629
mRNA cycle factors
Stress granule specific factors
122415629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
TFIIA
Motif
Other DBs
NCBI-GeneID:
122415629
NCBI-ProteinID:
XP_043283854
LinkDB
All DBs
Position
9:complement(20452582..20460859)
Genome browser
AA seq
890 aa
AA seq
DB search
MQNQLRENKFVSNMMMGGPVRPMQPSNMVPPHQAQHMHAAAHRTPQQMQHQQILSMHHMQ
HSIPPGSNPRQPVLMSVNAQNSNGSYISKISVVCLLLVLLSGVDAKDHQAMFNISTDILE
QMLGPSGCIEGKMVTIGLNRQMEPNAQMVAHPSQMLQQQRYQQQTPLQQPQQQKQQHQQL
NTSQQTSTEQKKVSSNQEDNDGVDERDESPSSRPLNPNPANVTSAVLANMKEKTPMCLVN
ELARFNKLQHQYRLTNEQGPAHKKRFTVTLKLGEEEYVAEGQSIKKAQHSAATEALTTTW
YRHPPPKPTRAMRVGHLGKGSSATGNLPPTVELNSLAMKRGELTVYTIRNAPPATPQPFF
QPGFGIRPPRLFNPHFPQFAPGFTPKREKLYLVTLKVGDREFIGRGATGQAARHDAASRA
LEQLKQLPIPEECPNAGNTGSSGGGGAGTVGSTSGSGKTIVENGVGTCSTTEDPSAEIKS
PVSLVHETALKRGLPVSFKVVSETGKPHIRTFTTQCTVGDKETIGEGSSKKVSKKNAAEL
MLEELKRLPPLPTTVTVRSAGMKRKPSNTKKPRRNLIRDNQGPRTDSDNTEEVDPISRLV
QIQHSKREREPIYRLVEEKGGPRRREFLMEVTIGQFSAQGIGSNKKLSKKAAAEALLAQL
GYSKPAQPQPTKPSIKSTSKDSNNSENRGNDGNSGKLRKVTFLEDEQINNKENQQQTIVG
GGGGRQLAPGLLLVDPAGQQDSKLSGNGGGNSVRDNLQNNQNGPTLQAVADALRGQQNNQ
QTTNGLSPKDQLMYLAQLLNFKATFVDFPKASYNRCLSLVSLSTDPPQVCHGSGSTVNES
RNQAVLTALRTLGKLGLDTSAKPEKEILPDDAIEIHDQTKKVVINQPIDK
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcaactaagagagaacaaattcgtatcaaacatgatgatgggtggaccggtg
cgtccgatgcaaccgtcgaacatggtaccgcctcatcaagctcaacacatgcatgctgct
gctcatagaaccccgcaacaaatgcagcatcaacaaatcttgtcgatgcatcacatgcaa
cattccataccgcctggaagtaatccacggcagcctgtgttaatgagcgttaacgctcaa
aattccaatgggagttacatctcgaaaataagcgtcgtgtgcctcttactggtacttcta
agtggtgtcgatgctaaagatcatcaagcgatgtttaacataagtactgacattttggag
caaatgcttggaccaagcgggtgcatcgaaggtaaaatggtaacgattggtcttaatcgt
caaatggaaccaaatgcacaaatggtagctcatccgagtcaaatgttacaacagcaacga
tatcagcagcaaacaccgttacaacagcctcaacaacaaaagcagcagcaccaacagctg
aacacgtcacaacaaactagtacggaacagaagaaagtatcatcgaatcaggaggacaat
gatggtgttgatgaaagggacgagagtccatcgagtcgtccgttgaatccaaatccggct
aacgtaacgagtgcagttttggcaaacatgaaagaaaaaactccgatgtgtctggttaat
gaactcgctaggttcaacaaattacaacatcaatatagactcacgaatgaacagggtcca
gcgcataaaaaaagattcaccgtcactctgaaactcggcgaagaagaatatgttgctgaa
ggacaaagtattaaaaaagctcaacacagcgctgccaccgaagctcttacgactacgtgg
tacaggcatccgccaccaaaacctacgagggctatgagagtcggtcatcttgggaaaggg
tcatcggcaacgggaaacttgccgccgaccgttgaattgaattctttagctatgaaacgt
ggtgaacttacggtttatacaataagaaatgcaccaccggcgacgccgcaaccttttttt
caacctggtttcggcataagaccaccgcgtctgtttaatccgcactttccccaatttgct
cctggctttacaccaaaacgagagaaattatatctcgttacgctcaaggtgggtgatcga
gaatttatcggtcgaggagcaacgggtcaagcggctcgacacgatgcagcaagtcgtgct
ctggagcaattgaaacaactgccaataccggaggaatgcccgaatgcaggtaacactgga
agcagcggtggaggcggggccgggacggtcggctcaacgagcggaagcggtaaaacgatc
gtagagaacggtgttggtacatgcagcactaccgaagatccgagcgcggagataaaaagt
ccagtatcattggtgcatgagacagcgttgaagcgaggtttaccggtaagtttcaaagtc
gtttcggagaccggaaaaccacatatccgtaccttcacgacgcaatgtacggtcggcgat
aaggaaacaattggcgagggttcctccaagaaagtatcgaaaaaaaatgcagcggaatta
atgctcgaagagcttaaaaggttgccaccgttgccaaccacggtaaccgtacgttcagcc
ggcatgaaacgtaagccttcgaatacgaagaaacctcggcgaaatctgatacgcgataat
caaggcccacgtacggattccgataacaccgaagaagttgatcccatttcccgcctcgtg
cagatacaacattcgaaacgggagagagaaccaatttataggctcgttgaagagaaaggc
gggccccgaagacgcgaatttctcatggaagttactataggacaattttccgcacaaggt
attggctcgaataaaaaattgagtaaaaaggctgccgcggaagcactcctcgctcaatta
ggctatagcaaaccagctcagccacaacctacgaaaccttcgataaaatctacctccaaa
gactcaaacaattcggaaaatcgaggcaacgacggaaattctggaaaattacgaaaagtc
acttttcttgaagatgaacaaataaataataaagaaaatcaacaacaaactatcgtcggc
ggaggtggtggacggcagttggcaccaggactattacttgtcgatcctgccgggcaacaa
gactctaaactctccggtaatggcggtggtaattccgttcgtgataatttacaaaacaat
cagaacgggcctacgctacaagctgttgctgatgcactcaggggtcaacagaataatcaa
caaactaccaatggcctgtcgcccaaggatcagttgatgtatcttgcccaacttctcaac
tttaaagctactttcgtcgatttcccaaaggcctcgtacaatcgctgtctctcgttggtt
tccctgagtacggatccaccccaagtatgtcacggcagtggatcgacggtgaatgaaagt
cgtaatcaggctgtgctgacagcactccgaacactcggaaaattgggtctcgacacgagt
gccaaacccgagaaggaaatattgccggatgatgcgatcgagatacacgatcaaacaaaa
aaagtcgttattaatcaaccgatcgacaagtaa
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