Venturia canescens: 122415789
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Entry
122415789 CDS
T09386
Name
(RefSeq) spectrin beta chain isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
vcan
Venturia canescens
Pathway
vcan04517
IgSF CAM signaling
vcan04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122415789
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122415789
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
vcan04812
]
122415789
Cytoskeleton proteins [BR:
vcan04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
122415789
Intermediate filaments
Intermediate filament-binding proteins
122415789
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
CCDC162_middle
RhoGAP-FF1
PH_11
Motif
Other DBs
NCBI-GeneID:
122415789
NCBI-ProteinID:
XP_043284181
LinkDB
All DBs
Position
9:20656162..20685037
Genome browser
AA seq
2403 aa
AA seq
DB search
MTTDISVVRTGWDPTLQQEIVDEYEYDGGNSSSRLFERSRIKALAGEREAVQKKTFQKWV
NSHLVRCSCRIGDLYVDLRDGKMLIKLLEILSGERLPRPTKGKMRIHCLENVDKALQFLR
EQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDNQETKSAKDALLLWCQ
MKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIHFDKLSKSNAIYNLNNAFNVAEDK
LGLTKLLDAEDIFVDHPDEKSIITYVVTYYHYFSKMKQETVHGKRIGKVVGIAMENDRMI
HEYESLTSDLLRWIESTIEALGDRRFANSLVGVQSQLSQFSNYRTIEKPPKFVEKGNLEV
LLFTLQSKMRANNQKPYTPKEGKMIADINKAWERLEKAEHERELALREELIRQEKLEQLA
ARFNRKASMRETWLSENQRLVSQDNFGFDLAAVEAAAKKHEAIETDIFAYEERVQAVMAV
SQELEAESYHDIERINDRKDNVLRLWNYLLELLRARRLRLELSLQLQQNFQEMLYILDSM
EEIKIRLLTDDYGKHLMGVEDLLQKHSLVEADINVLGERVKAVVQQSQKFMEQGDGYRPC
DPTIIVERVQQLEDAYAELVRLAVERRARLEESRQLWQFYWDMADEENWIKEKEQIVSTG
DIGHDLTTINLLLSKHKALENEIQSHEPQLMSVAAVGDELVRQQHFGSDRIQERLEEILG
MWNHLLDLAAFRRKRLEEAVDYHQLFADADDIDIWMLDTVRLVSSEDVGRDEANVQSLLK
KHKDVTDELKNYATTIEQLHQQASLLGEQDSKSAEVLERLASIDSRYKELLELAKLRKQR
LLDALSLYKLFSESDGVEQWIGEKNRMLDTMVPAKDIEDVEIMKHRYDGFEKEMNANASR
VAVVNQLARQLLHVEHPNSEEIVSRQNDLNQKWAELREKAEGKREALNSAHGVQTFHIEC
RETVSWIEDKKRILQQTDSLEMDLTGVMTLQRRLSGMERDLAAIQAKLDALEKEAQLIEE
EHPEEAALIRERITQIHTIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQAWLTKTQTD
VASEDTPTSLADAEKLLTQHQNIKEEIDNYTDDYLKMMEYGERLTAEAGDGDTQYMFLRE
RLNALKMGWEELHQMWANRQNLLSNSLNLQLLDRDARQAEVLLSQQEHILAKDETPANFE
QAENLIKRHEAFMTTMDANDEKINSVVQFASTLVDEGHFAADKVKKKAESISERRNANRE
KANQLMDKLKDQLQLQMFLQDCEELGEWVQEKHITAQDETYRSAKTVHSKWTRHQAFEAE
IASNKDRLQQLQQAADELIAQKPELSEIITPKVLELADQFEELETTTHDKGERLFDANRE
VLIHQTCDDIDSWMNELEKQIESTDTGSDLASVNILMQKQQMIETQMAVKARQVTELDKQ
AEHLQRTAPDGKMEEIKVKKEKVAQRFAQLKEPLVDRQRQLEKKKEAFQFRRDVEDEKLW
IAEKMPQATSNEYGNSLFNVHTLKKKNQSLRTEIENHEPRINLVCDNGRKLIDEGHEATE
EFTRLISELTEKWRELNDAVDERNNMLLQNEKAQQYFFDSTEAESWMSEQELYMMVEDRG
KDEISAQNLMKKHESLENAVEDYAETIRQLGETSRQLINDQHPLADQIAVKQSQVDKLYA
GLKDLAGERRAKLDEALQLFMLNREVDDLETWIAEREVVAGSQELGQDYDHVTLLWERFK
EFARDTETIGNERVAAVNGIADSLIATGHSDAATIAEWKDGLNEVWQDLLELIETRTQML
AASRELHKFFHDCKDVLGRILEKQNAMSDELGRDAGSVSALQRKHANFIQDLSTLQNQVT
QIQDESMKLQASYAGDKASEITNREAEVVAAWNNLQALCEGRKAKLEDTGDLFRFFNMVR
TLMIWMDDVVRQMNTSEKPRDVSGVELLMNNHQSLKAEIDTREDNLLACINLGKDLLARN
HYASTQIKEKLSALTDHRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPYLM
SQELGLTIDEVENLIKKHEAFEKSAAAQEERFSALERLTTFELKELKRREQEQEEEERRK
KEEAAAAEAARQARATPVTSPDEPPSERAEADGVTSGDRGEDDSHVALRKVSSTRTPQSQ
EKPKEVHAQKPARLSQPGEAIRPVTPSTPKSRASVPSTPTTPKGGSSSESGTLRRKERSR
SKSPFRSFHWKKSAKSPSLDRSGVSDDEHSFREQRSPSDDEFEGTLVRKHVWETMAKKAS
SRSWDKLYMVVRGQNLIAYKDQKSYKSTPDQPSKGEASLDLRGATIVVASDYTKKKHVFR
VKSQGGAEFLFQAKDDAEMHEWVRALNQAAQGTSGAGSSRAHTLPASTQAETKRRSFFTL
KKN
NT seq
7212 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgacatctcagtggttcgtacgggctgggatcctacgttacaacaagagatt
gtcgatgagtacgaatacgatggaggaaattcgagttcgaggctgtttgagcgatcgaga
ataaaggctttggcaggtgaacgagaggcagtgcagaagaagacgtttcaaaaatgggta
aactcacatctggtgcgttgctcgtgtcggatcggagatctgtacgtggatctacgagat
ggaaagatgttgataaagttattggagatattgtcgggtgagcgtttacctcgcccaacg
aaaggcaaaatgcgtattcattgtttggagaacgttgacaaagcgttacaatttttacgg
gagcaacgagtacatcttgagaacatgggctcgcacgatatagtggatggaaatccgcgc
ttgagtctcggtctcatttggacgataatattgcgtttccaaatacaagacatcacgatc
gaggagacggacaatcaggaaacaaaatcggccaaagacgctcttttactttggtgtcaa
atgaaaacagctggctatcacaatgtgaatgtgagaaatttcacgacttcgtggcgcgac
ggtttggcctttaacgcaataatacacaagcatcgaccggatttgatacattttgacaaa
ttgtcgaaatcaaacgctatttataatctgaacaacgctttcaacgtcgccgaggacaaa
ctcggactaacgaagcttctcgatgccgaagacatcttcgtcgaccacccggatgaaaaa
tctataataacgtatgtcgtgacgtattatcactatttctcgaagatgaaacaagagacg
gtgcacggtaagaggatcggtaaggtcgttggtatcgcgatggaaaacgatcgtatgatt
cacgaatacgagagccttacgagcgaccttctccgttggatcgaaagtacgatcgaggca
ttgggcgatcgccgtttcgcaaattccctcgttggtgtacaatctcaactgtcccaattc
tcgaattatcgtacgatcgaaaaaccaccgaaattcgtagaaaaaggtaatctcgaggtt
ctactcttcacactgcaatcgaagatgcgagctaataatcaaaagccttatacaccgaaa
gagggaaagatgatagccgatataaacaaagcgtgggagagattggagaaggctgaacac
gagcgcgaattggcattgagagaggaattaatacgtcaagaaaaattggagcaattggcg
gcgagattcaacaggaaagcgagtatgcgagaaacttggttgtccgagaatcaacgactc
gtgtcacaagacaattttggtttcgatcttgccgcggtcgaggcagcagcgaaaaaacac
gaggccatcgaaaccgacattttcgcttacgaggagcgtgtccaagcggttatggctgtc
tcacaggagctcgaggccgagagttatcacgatatcgagagaatcaacgatcgcaaagac
aatgttttacgtctttggaattatttgctcgagcttctgcgcgcgcgtcgtctgaggctc
gaactgtcattgcagctgcaacaaaacttccaggagatgctctacatactcgacagcatg
gaggagatcaagatacgtctgttgaccgacgattacggcaaacatcttatgggagtcgag
gatcttttgcagaaacattctctcgtcgaggccgacataaacgtgctcggtgaacgggtc
aaagcggtcgtgcagcagagtcagaagttcatggaacagggagacggttatcgtccctgc
gatcctacaataatcgtcgaacgcgttcaacaactggaagacgcgtacgcggagctggtg
cggctcgcagtcgagagacgcgctcgtctcgaggaatctcgtcaactttggcagttctac
tgggacatggccgacgaggagaattggataaaggaaaaagagcaaatcgtttcgaccggg
gacattggtcacgatcttaccaccattaatttattactctcgaagcacaaggctctcgaa
aatgagatacaatcccacgagccgcaactcatgtccgtcgccgcagtcggcgacgaactc
gttcgccaacaacactttggttcggatcgtatacaagagaggctcgaagagattctcgga
atgtggaatcatctgctcgatcttgctgctttccgccgaaaacgtctcgaggaagcggtt
gattatcatcaattgttcgccgatgccgacgacattgatatctggatgctcgacaccgtt
cgtctcgtgtcctccgaagacgttggtcgcgacgaggctaacgtccagtcgcttctcaaa
aaacacaaggatgttacggacgagctgaagaattacgccaccacgattgaacagctccat
caacaagcttctctcctcggcgaacaggactcgaaatcagccgaagttctcgaacgtctc
gcttcgatcgattcccgctacaaggaattgctcgagctcgccaagttacggaaacaacgg
ctgctcgatgctctctcgttgtacaaactgttcagcgagtccgacggtgtcgaacaatgg
atcggtgagaagaatcgcatgctcgacacaatggtgccggccaaggatatcgaagacgtt
gaaataatgaaacaccgttacgacggtttcgagaaagaaatgaacgccaacgcttctcgc
gtcgctgttgtcaatcagctggcgagacagctgctacacgttgaacatcccaactcggaa
gaaatagtttcccgacaaaacgatctcaatcagaaatgggccgagctcagggagaaggcg
gaaggtaagagagaggctctcaattccgctcacggcgttcaaaccttccacatcgagtgt
cgcgagaccgtctcctggatcgaggacaagaaacgtattcttcaacagaccgacagcctt
gaaatggatctgaccggtgtaatgactctccaacgtagattgagcggtatggagcgcgac
cttgccgcgattcaagccaagctcgatgccctcgagaaagaggctcagctcatcgaggaa
gaacaccccgaagaggctgctctcatacgcgaaagaattactcagattcacaccatttgg
gaacaacttacccaaatgctcaaagaaagagatgccaagctcgaggaggccggcgattta
catcgtttcctacgcgatctcgatcatttccaagcctggctgaccaagacccaaaccgac
gtcgcgtccgaagacaccccgacgagtctcgccgacgctgagaagcttctgactcagcat
caaaacatcaaagaagagatcgacaattacaccgacgattatctaaagatgatggaatac
ggcgaacgtttgaccgccgaagctggcgacggtgacacccaatacatgttcctcagggaa
cgtttgaacgcgctgaagatgggctgggaagagttgcaccaaatgtgggcgaatcggcag
aacttgttgtccaactcgttgaaccttcaattgctcgatcgcgatgcccgacaagccgaa
gttttgctctcccaacaggaacacatactcgccaaggacgagacacccgcgaatttcgaa
caagccgagaaccttataaaacgacacgaggcattcatgacgactatggatgcgaacgac
gaaaagatcaattccgtcgttcaattcgccagtacgctcgtcgacgagggacactttgcc
gctgacaaagtcaagaagaaggccgagagcatcagcgagcgcagaaacgcgaatcgcgaa
aaggctaatcaattgatggacaaactcaaggatcaattgcagctccaaatgttcttgcag
gattgcgaagagttgggcgaatgggttcaggaaaaacacatcaccgcgcaggacgagact
tatcgcagtgcgaaaaccgtacacagcaaatggactcgtcatcaggctttcgaggccgaa
atcgcgagcaacaaagatcgcctgcaacaattgcaacaagcggccgatgaactcatcgcc
caaaagcccgaactgagcgaaattataactccgaaagtgctcgaattggccgatcaattt
gaggaactcgagactacgacgcacgacaagggcgaacgcctgttcgacgcgaaccgcgag
gttcttattcatcagacctgtgacgacatcgactcgtggatgaacgagcttgagaaacaa
atcgaaagcaccgacaccggctccgatcttgcttccgtcaacatactcatgcaaaagcaa
caaatgatcgagacccaaatggccgtgaaagctcgtcaggttaccgagctcgacaaacaa
gccgagcaccttcaacgcaccgcgcccgatggtaaaatggaggagatcaaggttaagaaa
gaaaaggttgctcaacgtttcgcacaattgaaagaacccctggtcgaccgtcaacgtcaa
ctcgagaagaagaaggaagctttccaattccgtcgcgacgtcgaggacgagaaactctgg
attgccgaaaaaatgccacaagcaacgagcaacgagtacggcaattctttgttcaacgtt
cacacgctcaagaagaagaatcaatcgttgcgcaccgaaatcgagaatcacgagccgcgt
ataaatctcgtttgcgataatggacgaaaactcatcgacgaagggcacgaagctacggag
gaattcactcgtcttatttccgaattgacggaaaaatggcgcgagctcaatgacgccgtt
gacgagagaaacaatatgctgttacagaacgagaaagcgcagcagtatttcttcgattcg
accgaagccgaatcttggatgagcgaacaagagctgtacatgatggtcgaggatcgtggc
aaggacgaaatctccgctcagaatcttatgaagaagcacgaatctttggagaacgccgtc
gaggattacgccgaaacgatacgtcaactcggagaaacttcccgtcaacttatcaacgat
caacatcctcttgccgatcaaatagccgtgaagcaatcacaagttgacaagctgtatgcc
ggtctcaaagatttggctggtgaacgacgagccaaactcgacgaagcccttcaactgttc
atgctgaatcgcgaggtcgatgatcttgaaacgtggatcgccgagagagaagttgtcgcc
ggaagccaagagctcggccaagattacgatcacgttactttgctttgggagcgattcaaa
gaattcgcacgagacaccgagaccattggcaacgagagagtcgctgctgtcaatggaatc
gctgattctttgatcgctacgggacactccgatgccgctacgattgccgaatggaaagac
ggcttgaacgaagtttggcaggatcttctcgagctcatcgaaacgcgaacgcaaatgctc
gctgccagtcgcgagttgcacaaattctttcacgattgcaaagacgttcttggtcgtata
ctcgaaaaacagaacgccatgtcggacgaacttggacgtgacgccggctccgtttccgcc
ctccaaagaaaacacgccaatttcatacaagatttgtctactttacaaaatcaagttacc
cagatccaggacgaatccatgaagcttcaggcgagctatgccggggacaaggccagtgag
ataaccaatcgtgaagctgaagttgtcgccgcctggaacaatctccaggcactctgcgaa
ggcagaaaagccaagctcgaagacaccggagatctcttcagattcttcaacatggttcga
actctcatgatctggatggacgatgtcgtacggcagatgaacacctccgaaaaaccccgc
gacgtttccggcgtcgaattactcatgaacaatcatcaaagtctcaaagcagaaatcgac
acgcgagaagataatctgctcgcttgtatcaatcttggcaaagatttgctcgctcgtaac
cactacgccagcactcagatcaaagagaaattatccgctctcaccgatcataggaatgct
cttttgcaccgatgggaggaacgctgggaaaatttgcagctcattttggaagtttaccaa
ttcgccagggacgcagcggtcgcagaggcgtggctaattgcccaagaaccatatctgatg
agtcaagaacttggtctcaccatagacgaggtcgagaacctgataaagaaacacgaagcg
ttcgaaaaatcggcagctgcacaagaggagagattcagtgccttggaacgactcacaacg
ttcgagctgaaggaattaaagagacgagaacaagaacaggaggaagaggaaagacgcaaa
aaggaagaggctgcggctgccgaggccgcgagacaggcgagagcaacaccggtcacgagt
ccggacgaaccaccgagcgaacgtgccgaagccgacggtgtcacgagcggagatcgcggg
gaagacgattctcacgtggcactgcgcaaggtttcttctacacgaacaccgcaatcccaa
gaaaaacccaaggaagtgcatgcacagaagcccgcacgtctctcccaacctggagaagcg
attcgacccgttacaccgtcgactccgaaatcacgagcctctgttccttcgacaccaaca
actccgaaaggcggaagcagctcggaatccggtactttaagacgtaaggaacgcagtcgc
agcaaatcaccgttccgtagtttccattggaaaaagtcggccaaatcaccgagcttagat
cgcagtggtgtgagcgatgatgagcatagtttccgcgaacaaagaagtccgagcgacgac
gaattcgagggtaccctcgtgcgcaaacatgtctgggagacaatggcgaaaaaagcctcg
agcagatcgtgggataaactttatatggtcgtacgaggacaaaatttgattgcttacaag
gatcaaaagtcttacaagtcaacgcctgaccagccctccaagggcgaagcttcccttgat
ttgagaggtgcgacgatcgtcgtcgctagcgattataccaagaagaaacacgtcttccga
gtcaagtcgcaaggcggtgcagagttcttgttccaagcgaaagacgacgcagagatgcac
gaatgggtcagggctctcaatcaagcggcccaaggaacatccggagctggttcatcgagg
gcgcatactttgccggcgtcgacacaagccgaaacgaaacgacgcagtttcttcacgctc
aagaaaaattaa
DBGET
integrated database retrieval system