Venturia canescens: 122415855
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Entry
122415855 CDS
T09386
Name
(RefSeq) dynein intermediate chain 2, ciliary isoform X1
KO
K10409
dynein axonemal intermediate chain 1
Organism
vcan
Venturia canescens
Pathway
vcan04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122415855
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vcan03037
]
122415855
04812 Cytoskeleton proteins [BR:
vcan04812
]
122415855
Cilium and associated proteins [BR:
vcan03037
]
Motile cilia and associated proteins
Dynein arm
122415855
Cytoskeleton proteins [BR:
vcan04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
122415855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EIPR1
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_LRRK2
CFAP43_N
Beta-prop_IFT122_2nd
WD40_2
Motif
Other DBs
NCBI-GeneID:
122415855
NCBI-ProteinID:
XP_043284309
LinkDB
All DBs
Position
9:complement(20787843..20791736)
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AA seq
710 aa
AA seq
DB search
MPHSGAKKNASKLSDASKDQSSLVAKSRSSRVDLGAGEMEWMKGKVLLKPDDQLQLKDDE
LQEEIARVLTVHNPRIPDSLVEWSWKDREFIKLPNPPHLVTLLNVPGTLLHRESEEAKLQ
IAGGFVADFQDETQTQSREKQPDEEKENGEEEEEGEEGEEEGGEDAAKQADLAADETVEQ
EDEVVMKKPKKIPNQFNFCERAALTYGNVVRDMSTQTAPPPTATFNSHVLQWIIFDEYQE
DYAQQQREKEKERKLPAAQTRKDDLKKKAQIEAVAVTQRMLQAAKTLERMVNQNIFDEIS
QDYRYWNDPSDEFKDGEGSLLPLWKFQYEKTKKHDVTDMCFNSRYYDLFAVSFGTMSFHS
PVKTGVVCLFSLKNPSYPEWICPTESPVMCLDFSKQHPHLLVIGTMEGSVAVYNIMLPPA
VPQYKSNDVEQKHGGIVWEIRWAPDTEEGNLTFFSVSIDGKINHWVLNQNELGLTTVMTL
FLDRPPIPGPDGTLITLKGCGTCLAFHPKDNDIFLVGTEEGTIYKCNTAYSSVYMKTYNE
AHNMPVYRIVFNKYNSSIFASCSGDWRIKIWEDNNLEPLFMFDLGVPIGDVQWAPYSSTV
LACVSNDGKVSVFDLNVNKYRSICSQPVVSKRRSKLTRLAFNDVLPFIIVGDDKGTVNSL
KLSPNLRVKVKPTKKQLHLSETELETMKLEKLLSFVREPPVLVPPKDARL
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgcctcattcaggagccaaaaaaaatgcctccaaattatcggatgccagcaaagaccaa
tccagtctcgttgcgaaaagtcgctcatccagagtcgaccttggtgcaggagagatggaa
tggatgaaaggaaaagttttactcaaacccgatgatcagctccaattgaaggatgacgaa
ttacaagaagaaatagcccgagtgttgacggtccacaatccgagaattcccgattctctg
gttgagtggtcatggaaggatcgtgaatttatcaaactgccgaatccgccacatcttgta
acactgttgaatgttcctggaaccttgttgcatcgagaatcggaggaagcgaagcttcaa
attgctggaggattcgttgccgattttcaggacgagacgcaaacccagtctcgggaaaaa
caaccggacgaagagaaggagaatggcgaagaggaagaagagggtgaagaaggagaggaa
gaaggcggcgaggatgctgcgaaacaagcagatttggcagccgacgaaactgtcgagcaa
gaagacgaggttgtgatgaaaaaaccgaaaaagataccgaaccaattcaacttttgcgag
cgggcagctctcacttatggcaatgtcgttcgggacatgagcactcaaaccgcccctccc
cctactgcaacattcaattctcacgttctccaatggatcatcttcgacgagtatcaagaa
gattacgctcagcaacaacgtgaaaaggaaaaagaaagaaaactaccggcagcccaaacg
agaaaggacgatttaaaaaaaaaagctcagatcgaggctgtcgcggtaacgcagaggatg
ttacaagctgcaaaaacactcgaacgaatggtcaatcaaaatatatttgacgaaatatcc
caagactacagatattggaacgatccgagtgatgaattcaaagacggcgagggctcgctt
cttcccttatggaaattccaatatgagaaaacgaaaaaacacgacgtaactgacatgtgc
ttcaacagtcgttattacgatcttttcgccgtttctttcggcacaatgtcgtttcacagt
cccgttaaaactggggttgtttgtctattcagtctcaaaaacccttcatatccggaatgg
atatgtccaacggaatctccagtgatgtgcctcgattttagcaaacaacatcctcatctc
ctcgtaattgggacaatggagggtagcgttgcagtttataatatcatgttaccgcctgcg
gtaccgcaatataaaagtaacgacgttgagcagaaacacggaggcattgtctgggagata
cgatgggcaccggataccgaggagggtaatttgacatttttcagtgtaagcatcgacggc
aaaataaatcattgggtgctcaaccaaaacgaattgggtctgacgaccgtgatgacactt
tttctcgatcgaccaccgattcctggacccgatggtacactgatcacccttaaaggctgt
ggcacgtgtttggcatttcatcccaaggacaacgacatatttctcgttggcaccgaagaa
ggaacaatctataaatgtaacacggcgtacagcagcgtttatatgaaaacctacaacgag
gctcacaatatgcctgtgtatcgaattgttttcaataaatacaattcgagtatattcgcg
agctgttcgggtgattggagaatcaaaatatgggaggataacaatctggaacctctcttc
atgtttgatctcggtgtcccaattggtgatgtacaatgggcaccgtacagttcgacagta
ttggcttgtgtatcgaacgatggcaaagtgtcagttttcgatctaaatgtcaataaatat
cgatcgatctgcagtcaacctgttgtcagcaagagacgaagtaagctgacgagattagct
ttcaacgatgttcttccatttatcattgtaggcgatgacaagggcaccgtgaatagtctc
aagctctcgccgaatttacgagtaaaggtaaagcccacgaaaaagcaactgcatctttct
gaaaccgagcttgaaactatgaaactcgagaaattgttgagttttgtacgcgaaccaccc
gtacttgtaccgcccaaagacgccagactttaa
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