Venturia canescens: 122415994
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Entry
122415994 CDS
T09386
Name
(RefSeq) protein sprint isoform X1
KO
K23687
Ras and Rab interactor 2/3
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcan04131
]
122415994
Membrane trafficking [BR:
vcan04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
122415994
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
SH2
RA
RA_2
SH2_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
122415994
NCBI-ProteinID:
XP_043284566
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All DBs
Position
9:8953533..9117434
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AA seq
1399 aa
AA seq
DB search
MTSLVQREYGGAQRKRESTGSNASSYLLLLNSLATDLDCMLSELCTTPDPFQDRNDVFLE
PYLQQHGTVQVVSSPSTPPPNPLQHQLTHLHHVQSEESLSSEGSATSAGTSGSSEDSGSE
VACDITLIERLIRSHPIWFLPGIQRAGAFHLLQGKEEGNFVVRQSSQSDTMALSVRLPSG
KGPYIEHYLIQANKGKLSLETSENRFDNIPSLIAHYSQCCSDELPVQLTLPRAMRDAKNR
QQLSSLALLGQEFWRYPMANPKPPESSSSNTSSLSSFHGGNNNNACTPTTESIVLNLAPI
SYSDTANSSPTNTITTTATFASSLPRQPRPTPPNTLNLTTFNEPMDAKKERLDKISPCEK
LSQQLISPNLVQSVRCPSPIVHNVESNVLSPTESRTNFDSTKHSNESTKSEFSRSNKFTM
CTSTSSNFHQNISNFNNLSNSNSPLLPDVRNAIVDNNSLTQNVKTPPPPPPRWAKPGVSQ
SQNNFTVTTTVTFNVNQTNDVITSQQNTPSDPSTSLLSPQSASSNKSLTSNLSSSKSGLS
STTPVLSPTSKLVSSIGTKTPNVLSPTTPSGTSKSKRRRDREARKNSQHYQESDILESYY
RSSPGDKVSDYEDIWNTTDRSNHSTWSPNDKLKRNETPNTSQERTKNSNDRLVPIERIVS
PSDRSPNERLLENEQFIARTDRLVLRNDKTNGNEKLSYKEVTSPEFTSFKPILDHKSPES
GSPEETGMGKRPDLLSRVCSANSLNSPNTMTPPKNKLGLILTQSETNSPMTPESKQGSPF
YAEPADAIAQSVAMVPRRRNKNNPMTNKFRHSEPGWFQTPVGHQANQLHPIDWDESEETE
DKTPLISSSVDNLAKRLSTREIKKIPRAKPVQPPKIRNKIFNDTSWAVDSSWEFIGNEGD
DGEADYDCDADYEGDPVTRKFPDDECERDVVGNTLTVQSIILQRYPELLKSPDTTESLYS
DRNSSYDNVERRMERNQTPESRNERTDDPSEWETMLDTDESDVERIKRNTSFKERLDPLL
SPPRLQALRNRDAAGTGSTIRSYALQLAADKTTTFSQNIENFIQCTKEGKEASPHIVMRN
IRQFMSGMKNYLVKHGEREFEKEVEKERLKLKANEFLNLDAILEGVMMGLVVRPLREHVY
RLFVDHYGSTGSLQTLAESIQYAQGKHIQDLGVRPKIIPPSDASLEKILRYIDRLQKSDS
PLEKLENLLAAISAIFNSVKHANSGRHVTLGADDLLPLLVWVLVRGKVVDAEVEAEYMWG
LLHPSLLTGEGGYYLTTLSSAVHVLKTFKSSQGTMSTLNGCGTPDCSSVLRILVPDELHG
SLNTRTLPIRPNMNTRDVCRILAHKIRCTNPQDYGLFKLVQGEETLLGDQECPQEISHCL
FAYKRIDAKIAWPRTTISS
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcattggtccagagggagtacggcggcgcacagagaaagagggagtcaaccgga
agcaatgcctccagctacttgctcttgctcaattcgctggccacagacctggactgcatg
ctgagcgagctctgtacgaccccggaccccttccaagatcgaaacgatgtcttcctggag
ccgtacctccagcaacacggaaccgttcaggtcgtcagctcgccgagcacaccaccgccg
aacccacttcagcatcagcttacgcacctacatcatgtacagagcgaagaatcgctgtcg
tccgagggttcagcgacatcggcagggacttccggttcttcggaagactctgggagcgaa
gttgcatgtgacataaccctgatcgaacggctcattcgttcgcatcccatttggtttctt
ccagggattcaaagagccggagcttttcacttgttgcaaggcaaagaagaagggaatttt
gttgttcgacaatccagtcagagcgacacgatggcattgtcggtcagattgccatcgggc
aaagggccttacatcgagcactacctcattcaagcaaataaaggaaaattgagcctcgaa
acgagcgaaaatcgttttgataatattccttccctcatcgcacactactcgcagtgctgc
agcgacgagttaccggtgcaacttacactgccaagggcgatgagggatgctaaaaacaga
cagcagctctcctcgctcgcgcttttgggtcaggaattttggaggtatccaatggctaat
ccaaaacccccggaaagtagcagcagcaacacatcgagccttagcagctttcacggaggc
aataataataatgcatgcacgccaacgactgagagcatagtgctcaacttggcaccgata
tcttacagcgatacagcaaattcttcgccaacgaatacgataacaacaactgccacattc
gcctcatcactgccaagacagccaaggccaacgcctccgaatacattgaatctcacgacg
ttcaacgagcctatggacgcgaagaaagaacgtctcgataaaatatcaccgtgtgaaaaa
ctgtcgcaacaattgatctcgccaaacctcgtacagagcgtacgttgcccatcgccgatc
gttcacaacgtcgagagcaacgttctcagccctacggaatcccgaacgaatttcgacagc
acgaaacattcgaacgagagtacaaaaagcgaattctcacgtagcaataaattcacaatg
tgcacatcgacctcctcgaattttcaccaaaatatctccaacttcaacaatttgtcgaac
tccaattcaccgttgttacccgatgtcaggaacgccatcgtggataacaactcgttgaca
cagaacgtcaaaactcctccaccgcccccacccagatgggccaaaccgggagtctctcag
agccaaaataatttcacggtcaccacgaccgttaccttcaacgtcaatcaaaccaatgac
gtaatcacttcacagcaaaacactccatcggatccgagcacgtctctgttgagtccgcag
agcgcgagctccaacaagtctctaacgtcgaatctctcgtcgtcaaagtcaggcctgtcg
tcgacaacgccggtgctctcacccacgtcgaagctagtctcgagcatcggtacgaaaaca
ccaaacgttttatctccaacgacaccctcgggtacgagcaaatccaagagacggagagat
cgcgaagcgagaaaaaattctcagcattatcaagaatcggatattttggagtcttattat
cgaagctcgcccggcgacaaggtctccgattacgaggacatatggaacacgaccgatcga
tcgaaccactcgacgtggtcacccaacgacaaactcaaacgcaacgaaaccccaaacacc
agtcaggaacgcacgaaaaattccaacgatcgactcgtacccatcgaacgaatcgtcagc
ccttccgatcgttctccaaacgaaagactcctcgaaaacgaacaattcatcgccagaacc
gatcgactcgtactcagaaacgataagaccaatgggaatgaaaaactcagctacaaggaa
gtcaccagtccagagttcaccagcttcaaacctatcctcgatcacaaaagccccgagtct
gggtcgcctgaagaaaccggcatgggaaaacgacctgatctgctatcacgagtttgcagc
gccaattctctgaacagtccgaacacaatgacaccaccgaaaaacaagcttggcttgatt
ctgacacagtcggagaccaacagcccaatgacaccggaatcgaagcaaggcagtccgttt
tatgcagagccagcggacgccatcgctcaaagcgtcgcgatggtaccgcgtagaagaaac
aagaataatccaatgaccaacaaatttcgtcatagcgagccaggatggtttcaaacgccg
gtcggtcatcaggcaaaccaattgcatccgatcgactgggacgaatccgaagagacggag
gacaaaactcccctcatttcctcgtccgttgataatcttgctaaacgccttagcacgaga
gaaatcaaaaaaataccacgtgccaaacctgttcaaccaccaaaaatcagaaacaaaatt
ttcaacgacacttcctgggcggtcgactcgagctgggaatttatcggaaacgaaggagac
gatggtgaagcggactacgactgcgatgccgattacgagggcgatccggtgacccgaaaa
tttccggatgacgagtgcgagcgcgacgtagttggcaacacgctcaccgtacagagtata
atattacaaaggtatccggaattactcaaatcaccggacaccaccgagtcattgtatagc
gatagaaattcgtcgtacgacaacgttgagagacgaatggagagaaatcaaacacctgaa
tcccgaaacgaacgtaccgacgatccttccgaatgggaaacgatgcttgacaccgatgaa
agtgacgtcgaaaggatcaagagaaacacaagtttcaaggaacgcctggatccacttctt
tcacctccaagactgcaggccttgaggaatagagacgcggctggaactgggtcaaccata
aggtcgtacgccctgcaattagcggcggacaaaacaaccactttctcccagaatattgag
aattttatccaatgtacaaaagagggcaaggaggcgagtcctcacatcgtcatgaggaac
atacgccaattcatgtccggcatgaaaaattatcttgtcaaacacggcgagcgtgaattc
gagaaggaagtcgagaaggaacgactcaaattgaaggccaacgaattcttgaatctcgac
gcgatactcgagggcgttatgatgggactcgtcgttcgaccactcagggaacacgtgtac
agactttttgttgatcattacggtagcacgggatcgcttcaaacactcgccgaaagcata
cagtacgctcagggaaaacacatccaagatttaggagtaaggccgaaaatcataccacca
tccgacgcgagccttgaaaagatcctgaggtacatcgaccgtttgcaaaagtctgactct
ccattggaaaaactggagaatctactggctgcgatttccgcgatatttaactcggtgaag
cacgccaactccggaagacacgtgaccttgggagccgatgatcttttacctttgctcgtg
tgggtattggtacgaggaaaggtggtcgatgccgaagtcgaggctgaatatatgtggggc
cttctccatccttccctcttaactggcgagggtggatattatctgacaactttgtccagc
gctgtgcacgtactcaaaacctttaaatcgagccaaggaaccatgtctactttgaacgga
tgtggaactcccgactgctcttcggtgttaagaattttggtaccggacgaacttcatggc
tcgctaaacacacgaacacttccgatacgaccgaacatgaatacgcgagatgtttgtcga
attcttgcccacaaaataagatgcacgaatcctcaggactacgggctgttcaaactggtg
caaggcgaggaaactctactcggtgatcaggaatgcccacaggaaatctctcactgccta
ttcgcttataaacggatcgacgcgaaaatcgcatggccgagaacaactatcagctcatga
DBGET
integrated database retrieval system