Venturia canescens: 122416070
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Entry
122416070 CDS
T09386
Name
(RefSeq) transcription factor Sox-19b-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcan03000
]
122416070
Transcription factors [BR:
vcan03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122416070
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
122416070
NCBI-ProteinID:
XP_043284680
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Position
9:17070219..17097874
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AA seq
379 aa
AA seq
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MRAGGNMCDGGAFTDTLRCIPGMSVGSPPGGGGVGPGGVGLGAAKKPETKHVKRPMNAFM
VWSRLQRKKIAQENPKMHNSEISKRLGAAWKLLPDDEKRPYIDEAKRLRNLHMKEHPDYK
YRPRRKPKSLKKEGYSYSIPYASVSMDALRAGMAGGMAQGGMGSFYGPAAAYGSISAASM
AAAAAAAAQQSMSAGLGTPGQVVSSMDAMKYSIEADKYRPAYMPPSTLAMSMYSDPKYLD
STPKPYLDRNYFDSAKAYFEQSKLYMDQKQSNAEYNRPSYEPNKLYEESSPIGSARSPAA
DSPDVMKQQHSDRTEQHGSSSASSTSTSAASPGAPRVPTYYHDSVQAGGLFAPQSGQYSS
FQPAPAPGNEFRRPLTVIF
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagagctggcggcaacatgtgcgacggtggtgcgttcacggatacactccgttgtatt
cccggcatgtccgtcggatcgccacccggtggcggcggcgttggtccgggtggagtcggc
ctcggagcagccaaaaagcctgaaactaaacacgtcaaaaggcccatgaacgcgttcatg
gtttggtcaagattacaacgcaaaaaaattgctcaagaaaatcccaagatgcacaacagc
gaaatatccaagaggctcggagctgcgtggaaacttttaccggatgatgaaaaacgtccc
tacatcgatgaagctaaaaggctgaggaacttgcacatgaaagaacatcccgactacaaa
tacagaccgaggagaaagccaaagtcacttaaaaaagaaggctattcttacagtattccc
tatgccagtgtctccatggatgctcttcgagccggcatggctggtggcatggcacaaggg
ggtatgggatccttctacggaccagcagcagcttatggatccatttcggcagccagcatg
gctgcggctgctgcagccgctgcccaacaatcaatgtccgccggtctcgggacacctggc
caggtcgtaagttcaatggacgcgatgaagtactcgatagaggcggacaaatacaggccg
gcttacatgcccccgagcacgttagcgatgagcatgtattcggatccgaagtacctcgac
tcgaccccgaagccgtatctcgatcgcaattacttcgattcggcgaaggcttatttcgag
cagtccaagttgtacatggatcagaagcagagcaacgccgaatacaatcggccgagctac
gagccgaacaagttgtacgaggaatcgagcccgatcggatcggcgagatcgcccgcagcc
gactccccggacgtaatgaagcagcagcactccgaccggacggaacagcacggctcgtcg
agcgcgagctcgacctcgacctccgcggcgagccccggcgctccccgagtgcccacttat
taccacgactccgtgcaagccgggggactcttcgcccctcagtccgggcagtacagtagc
tttcaacctgctcccgcacccggtaacgagttccgacgacctctcaccgttatcttctga
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