Venturia canescens: 122416146
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Entry
122416146 CDS
T09386
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vcan01009
]
122416146
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcan03019
]
122416146
04131 Membrane trafficking [BR:
vcan04131
]
122416146
03036 Chromosome and associated proteins [BR:
vcan03036
]
122416146
Enzymes [BR:
vcan01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
122416146
Protein phosphatases and associated proteins [BR:
vcan01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122416146
Messenger RNA biogenesis [BR:
vcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122416146
Membrane trafficking [BR:
vcan04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
122416146
Chromosome and associated proteins [BR:
vcan03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
122416146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
CHZ
C1_2
Motif
Other DBs
NCBI-GeneID:
122416146
NCBI-ProteinID:
XP_043284789
LinkDB
All DBs
Position
9:19991983..19999443
Genome browser
AA seq
1149 aa
AA seq
DB search
MTDSGARDNFFNAAKRLIDSEIELINIVESSRRTSSRNIKRDDTMSKPSRNNKQADKAAT
KKSKVKPSPALVAAKREAAQKKQSQSKKLENIFIRDIYQSAIEAKNMIRGATGLTYDRSM
AEHYCLWDKNHPECPERFTRVLERCRELGLIERCQFISPMVAKQEEILLKHTQSQIDMLR
ATEGCEDNEALEKIASRYDAIYIHPSTYKLSLLATGSTINLFEKICRGNVQNGMAVIRPP
GHHAMKSEYCGYCFFNNVAIGAEKMLRSNLAKKILIVDWDVHHGQATQQMFYDDPRVVYF
SIHRYENGEFWPNLRESDYHYVGEKDGTGYNFNVPLNKTGMTNGDYLAIFHQILLPMAYE
FQPDLVIVSAGFDCALGCPEGEMEVTPGFFPHLLSSLLSLANGKVAVVLEGGYCLDSLSE
AAALTLRTLLGDPCPPYQDLEPPCETLKETILNVIYAHRAYWKCFQFQESFSIHSESENR
EENNNRHLPVVIYKGDETKPDHYETRDCYPVQSETVVRHLKNRLVALKQVTHLGKAPKRV
TLVYDERMLKHCDPTDDSHPEKPDRISGIFTKHEEYELLNRCQVIKGREATEEELLLAHS
ASHVNDMRETCTAKPGELKKKGGKLNSVFLNRDTWNSACVAAGSVLQVVDSVLNGESQSG
VAIVRPPGHHADDETACGFCIFNNIAVAAKYATRFHHLKRVLIVDWDIHHGNGTQAILVD
DPNVLYISIHRYDNAAFFPNSKEANYTFVGTGAGEGYTVNIPWNRKRMGDAEYIAAFQQI
VMPIAYQFNPELVLISAGFDACIGDPLGGYTVSPETYGHLTHWLSGLANGRVVIALEGGY
NVNSISYAMTMCTKALLGDPLPALGVYQAPCPSAISTIKNVLKIHKQYWPNLCFQMALPK
ENILPEAKSFESKNTVLSSPLTETKIAFEEIENEKLEMSMRERQRLETITAEEMAELQKE
IEKMTILKTAKECIDPGQKDLGGQNNGSTSGASGSGQQQDQGEASGVTANPSLLDYLSDN
IQALVQGEMFAIIPLRDCPHLDTVEEVPVSGINVRDPCQECGSTAENWICLRCYTVHCAR
NINEHAIMHGQTAEHPLTLSFSDLSVWCYGCEAYIDNPRLFAARNAAHLSKFNHELPWTY
NEDSSNARE
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgacggattctggcgcgagggacaattttttcaatgctgccaagagactgatcgacagt
gagatcgagctcattaatatcgttgagagctcgagacgcacaagttcgagaaatattaag
agagacgatacaatgtctaagccttctaggaacaacaaacaggctgacaaggcggccaca
aagaaatctaaagtaaaaccgtcaccggcattagttgctgcaaaacgtgaagctgcacag
aagaaacaatctcaatcaaagaaactggaaaatatttttataagggatatttatcaaagc
gcaatagaagcaaagaacatgattcgtggagcaactggtctaacatacgatcgttctatg
gcagaacattattgtctttgggacaaaaatcatcctgaatgtccagagagattcacaaga
gttttggaacgatgcagggaacttggtctcatcgagaggtgccaattcatcagcccaatg
gttgccaaacaagaagaaattcttctgaaacatacacagagccaaattgacatgcttcga
gcgacagagggttgcgaggataacgaagctttagaaaaaattgcatcaagatacgatgcc
atttatattcatccgtcaacttacaaactttcactattagcaactggttcaacaatcaat
ctcttcgaaaaaatttgtcgtggcaatgtgcaaaatgggatggccgtaataagaccaccg
ggacatcatgcaatgaaatcagaatattgcggctactgtttttttaacaatgttgcaata
ggggctgaaaagatgctgagaagcaacctggctaaaaaaattttaatagtcgattgggat
gttcatcacggtcaagctacacaacagatgttttatgatgatcccagggttgtatatttc
tcaattcatcggtatgagaacggagaattttggccaaacttgagagaatccgattatcat
tatgttggtgaaaaagatggaactggttataatttcaatgtacctttgaacaaaactgga
atgacgaatggcgattatttggcaatatttcatcaaattcttctgccaatggcctatgag
tttcaaccggatctcgttatcgtctcggctggttttgattgtgccctcggctgtcccgag
ggtgaaatggaagttactccagggttctttcctcatttactttcgtcattgttgtctctg
gctaatggtaaagtcgctgtggtgctggagggcggttactgcctggactcgttatcagaa
gctgctgcacttaccttacgaacactccttggcgatccatgtcctccctatcaagatctc
gaacctccctgcgaaacactgaaagaaacgattctgaacgtaatttatgctcaccgagcc
tactggaaatgcttccagttccaagaatctttcagtattcattcagagtccgaaaatcgt
gaggaaaataacaacagacatttgccagtcgtcatttacaagggtgacgagacgaaacct
gatcattatgaaactcgcgattgctatccagtgcagagcgaaacggtcgtcaggcatttg
aaaaatcgtctcgttgcgttgaaacaagtcacgcatttggggaaagcgccgaagcgcgtt
actctcgtatacgacgagcgaatgctcaaacactgcgatccaacggacgattcacatccg
gaaaaaccggatcgtatttccggtatatttacaaaacacgaagaatacgaattattaaat
cgttgtcaggtgatcaaaggacgcgaagcaacggaggaagagttgctcttagctcattcg
gcgagtcatgtaaacgacatgagggaaacatgcaccgcgaaacctggtgaattgaagaaa
aaaggtgggaagttaaactccgtttttctgaaccgggacacgtggaatagtgcctgcgtc
gctgctggttcggtgcttcaagttgtcgacagcgttttgaatggagagagccaatccgga
gtcgcgatcgtgaggccacctggacatcacgccgacgacgagaccgcttgtggtttttgc
atttttaacaacattgctgtcgctgctaaatatgcaacacgattccaccatttgaaaaga
gtgttgatcgtcgactgggacatccatcacgggaatggaactcaagccattctcgtagac
gatccaaacgtcttgtatatctcaattcatcgatacgacaacgctgctttcttcccgaat
tctaaagaagcgaactacacgttcgttggcacgggtgccggcgaagggtacaccgtcaat
ataccttggaaccgaaaacgaatgggtgatgcagaatacatcgctgctttccaacaaata
gtaatgccaattgcttatcaattcaatcctgaattggtgctgatatctgcaggttttgac
gcttgcattggtgatccactcggtggttacaccgtatccccggaaacttatggtcacttg
actcactggttgtcgggattggcgaatggtcgcgttgtgatagcgctcgaaggtggttac
aacgtgaattcaatatcatatgcaatgacgatgtgtacaaaggcattactgggcgatcca
ttgccagcgctcggagtttatcaagcgccttgtccaagtgcgatatcgaccattaaaaat
gttctcaaaattcataaacaatactggccgaatttgtgtttccaaatggcattaccaaag
gaaaatattttgccagaagcaaaatcattcgagagtaaaaacaccgttttatcgagtcca
ttgaccgaaacaaaaatagctttcgaggaaattgagaatgaaaagcttgagatgagcatg
cgagaacgccaacgcttggaaactataactgccgaagaaatggctgaattgcaaaaagaa
attgagaaaatgaccattctcaaaactgccaaagaatgtattgacccaggacaaaaagat
ttgggtggtcaaaataatggatctacttccggtgccagtggtagcggtcagcaacaagat
caaggcgaagcttcaggcgtaacagccaatccaagcctgcttgattatctttcagataat
atccaggctctagttcaaggcgaaatgttcgcaataataccattgagggattgccctcat
ctcgacaccgtcgaggaagttccagtaagcggaataaacgttcgcgatccttgtcaagaa
tgtggtagcacagctgaaaattggatttgtctgcgatgctacaccgtccactgtgctcgc
aatatcaatgaacacgcaataatgcatggccaaacagccgagcatcccttgactctgagt
tttagcgatctctcggtttggtgttatgggtgcgaggcctatatcgacaatccgcgattg
tttgctgcgcgaaacgcggcacacttgagtaaatttaatcacgagctaccgtggacgtat
aacgaagattcatcaaatgcgagagagtga
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