KEGG   Venturia canescens: 122416147
Entry
122416147         CDS       T09386                                 
Name
(RefSeq) cullin-4B isoform X1
  KO
K10609  cullin 4
Organism
vcan  Venturia canescens
Pathway
vcan03420  Nucleotide excision repair
vcan04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:vcan00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122416147
  09124 Replication and repair
   03420 Nucleotide excision repair
    122416147
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vcan04121]
    122416147
   03400 DNA repair and recombination proteins [BR:vcan03400]
    122416147
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vcan04147]
    122416147
Ubiquitin system [BR:vcan04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     122416147
DNA repair and recombination proteins [BR:vcan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      122416147
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      122416147
Exosome [BR:vcan04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   122416147
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DUF2018
Other DBs
NCBI-GeneID: 122416147
NCBI-ProteinID: XP_043284792
LinkDB
Position
9:19980741..19987545
AA seq 766 aa
MTDTATAASNAQKRANFSALTVNNPNGVNKISPSLAIAKPGSARKLVIKNFKNKPKLPEN
YQEQTWEKLREAVVAIQTSKSIRYSLEELYQAVENMCSHKMASTLYANLTVLTESHVKAN
IEQFLAESMDRHIFLKKMNECWQSHCRQMIMIRSIFLYLDRTYVLQNPSISSIWDMGLHL
FRLHIVLNNLVQTRTVEGLLMLIEKERQGDTVDRTLLKSLLRMLSDLQIYQEAFENKFLM
ATERLYAAEGQRLMNEHDVPEYLAHVDKRLQEENERLLHYLDMSTKWSLIHTVEKQLLSE
HVSSILQKGLSGLLDENRISDLTLLYNLYNRVKNGLLELCLNFNSYIKKKGKTIVIDPEK
DKTMVQELLDFKDKMDNIVNTCFYRNEKFGNSLKEAFEAFINQRANKPAELIAKFVDMKL
RAGNKEATEEELERLLDKIMVLFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLS
KLKQECGGGFTSKLEGMFKDMELSKDINIAFKQQYSGNLQNELLASNLDLTVSILTMGYW
PTYPVMEVTLPTEMVQYQEVFNKFYLGKHSGRKLQWQPTLGHCVLKAWFHAGNKELQVSL
FQALVLILFDDTDDLSLEEIKATTNIEDGELRRTLQSLACGKARVLQKNPRGRDVADNDR
FVFNSEFTNKLFRIKINQIQMKETNEEQKATEERVYQDRQYQIDAAIVRIMKMRKTLTHN
LLISELYNQLKFPVKPADLKKRIESLIDRDYMERDKDNANQYNYVA
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgacggacacggcaacagcggcgtcaaacgcccaaaaaagagccaatttctcggctcta
acggtcaacaatccaaatggtgttaacaaaatatcgccgagtttggcaatcgccaaacca
ggctccgcgagaaaactcgtcatcaaaaacttcaaaaataaaccaaaactaccagaaaac
tatcaggaacaaacatgggagaaattaagagaggctgtcgtggcgatacagacaagcaag
agcatacgttattctctagaggagctttatcaagccgtagagaacatgtgcagtcacaaa
atggcatcaactctctacgccaatcttactgtactgacagagtcccatgtgaaggcaaac
atagaacaatttttggctgagtctatggatcgtcacatcttcctgaaaaaaatgaatgaa
tgttggcaatcccattgtcgccagatgatcatgattaggagtatctttttgtacctggat
agaacttacgtccttcaaaatcctagtatatcatcaatttgggacatgggattacatctt
tttagacttcacattgtattaaacaatttagtgcaaacacgcactgtagaaggactttta
atgctcattgaaaaagagcgtcagggtgacaccgtagaccgcacgcttctcaagtcattg
ctcagaatgctatcggacttgcaaatataccaggaggcctttgaaaacaagttcctgatg
gcaacagaaaggctttatgcggcagagggtcaacgactgatgaacgaacatgatgttccg
gaatatctggctcacgtcgataaacgccttcaagaagaaaatgagagattacttcattat
cttgatatgtcgacgaaatggtcgctcatacacacggttgaaaaacaattgttatccgag
cacgtttcaagcatattacaaaaaggattaagcggtttgttggacgagaatagaatcagt
gacttaacgctactgtacaacttgtacaatcgagtcaaaaatggtctcctcgaattgtgt
ttaaatttcaatagttatataaagaaaaaaggcaaaacgatagtaatagacccagaaaag
gataaaactatggtccaagaattactcgacttcaaagacaagatggacaatattgtgaac
acttgcttctacagaaacgagaaatttggcaacagtttgaaagaagccttcgaagcgttt
atcaatcagcgagcaaacaagcccgcagaacttatagccaaatttgtggatatgaaactc
cgagcagggaacaaagaagcaacagaagaggagctagagagattgcttgacaaaataatg
gtcctctttcgttttattcatggtaaagatgtgttcgaagctttctacaaaaaagatttg
gcgaaaagattgttggtgggaaaatcagcttcggtcgatgctgaaaagtcaatgttgtca
aaattgaagcaagaatgcggtggtggtttcacgagcaagctcgaagggatgttcaaggat
atggaacttagcaaagatattaacattgcttttaagcagcagtattcaggaaatctacaa
aacgaattactagccagtaatcttgatctcacggtgtctatactcaccatgggatattgg
ccaacttaccctgtgatggaagttactctgcctacggaaatggtacaataccaagaagtt
ttcaacaaattttatctcggcaaacacagcggtcggaaattacaatggcaaccgacttta
ggacattgtgtccttaaggcttggttccacgcgggcaacaaagaattgcaagtatcgctt
tttcaagctttagtactaatattgttcgacgacacggatgatttgtcgctcgaggaaatc
aaagcaacgacgaatatcgaggacggtgaactgcgaagaactttacaatctttggcgtgc
ggcaaagctcgggtcctgcaaaaaaatccaagaggccgcgacgttgcagacaacgataga
ttcgttttcaattcggaattcacaaataaattattcagaataaaaatcaatcaaatacag
atgaaagaaacgaacgaggaacaaaaggcgactgaagaaagagtctatcaagatcggcaa
tatcaaattgacgcagctatagtaaggatcatgaaaatgagaaaaactcttacccataat
cttttgataagcgagctctacaatcaattgaaattccctgtgaagcctgccgacttgaag
aaacgaatcgagtcgttgatagacagagattacatggagcgtgataaagataacgctaat
cagtacaactacgttgcgtaa

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