Venturia canescens: 122416166
Help
Entry
122416166 CDS
T09386
Name
(RefSeq) transcription factor SOX-14-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcan03000
]
122416166
Transcription factors [BR:
vcan03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122416166
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
122416166
NCBI-ProteinID:
XP_043284821
LinkDB
All DBs
Position
9:17187974..17198972
Genome browser
AA seq
325 aa
AA seq
DB search
MSSKSLQNEHVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPF
IDEAKRLRTLHMKEHPDYKYRPRRKPKSLVKKENKFGFSISPLMSTGDTLNNISRGLLPP
LTAPSHHSLLGHEDLKIPRFFPPFPYPLYPIQHKLGEDFNGGKLAADLAFQAIYGSGNFY
SSHQAVGSGWPGLSAPSCVQPNCGCPSSSPKDPKRSSAYLVPSKPDERSFGTPVKPEDDR
YHSEAAREAARADFRYRKLEDGAAYPPAVEKQPEEAKLEEHYASSSPAPAERNEKFIPAP
VKPESTFSVQSLTASPPMTNRNHVI
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaagagcctccaaaatgaacacgttaagagacccatgaacgcttttatggtg
tggtccagaggacagagacgaaaaatggcacaggaaaatccgaaaatgcacaattcggaa
atatccaagagactcggagctgaatggaaactactgagcgagagcgagaaacgaccgttc
atcgacgaggccaagagattgagaacgttgcacatgaaagagcatccagattacaaatac
cgtccaagaagaaagccaaagtccctggtgaagaaagagaacaaatttggtttttccata
tccccattgatgtcaacgggcgacacgttgaacaacatatcgagaggtttgctgccaccg
ttgacagcgccgagtcaccactcactactgggccacgaggatcttaagattcctcgattt
ttcccgccctttccgtacccgctgtacccgatccagcacaagctgggggaagacttcaac
ggtggtaagctcgcggcggatctggccttccaggctatttacgggagtggaaatttttat
tcgagtcatcaggcagtggggagcggatggccgggtctctcggcgccgtcgtgcgtccaa
ccgaactgtggatgtccctcgagttccccgaaggatcctaagcgatcatcggcgtacttg
gtgccgagcaaaccggatgagcgttctttcgggacccccgttaagcccgaggacgaccgt
taccacagcgaagccgcgcgagaggcggcgagggctgactttcgatatcgcaaactcgag
gacggagccgcgtacccaccggctgtggagaagcaaccggaagaggcgaagctggaggag
cattacgcctcttcgtcgcctgcgcccgccgagaggaacgaaaagtttattcctgcaccc
gtcaaaccggaaagcacattctccgttcagagtctgaccgcgagtccaccgatgacgaac
cgcaaccacgtcatatga
DBGET
integrated database retrieval system
