Venturia canescens: 122416844
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Entry
122416844 CDS
T09386
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
vcan
Venturia canescens
Pathway
vcan03030
DNA replication
vcan03410
Base excision repair
vcan03420
Nucleotide excision repair
vcan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122416844
03410 Base excision repair
122416844
03420 Nucleotide excision repair
122416844
03430 Mismatch repair
122416844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcan03032
]
122416844
03400 DNA repair and recombination proteins [BR:
vcan03400
]
122416844
DNA replication proteins [BR:
vcan03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122416844
DNA repair and recombination proteins [BR:
vcan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122416844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
AAA
BRCT
BRCT_2
PTCB-BRCT
RuvB_N
nSTAND3
AAA_30
Rad17
AAA_33
RNA_helicase
AAA_22
AAA_14
AAA_5
AAA_17
AAA_16
NTPase_1
AAA_19
Sigma54_activ_2
AAA_assoc_2
DUF1824
PoNi_C
AAA_18
Motif
Other DBs
NCBI-GeneID:
122416844
NCBI-ProteinID:
XP_043285853
LinkDB
All DBs
Position
10:complement(7997115..8005568)
Genome browser
AA seq
1006 aa
AA seq
DB search
MQRDIKSYFKVSSRGSTDPKKSKAKNNSILSSDEDEKKPKTSSKDTKTSKRSTKTVILSD
SEDDTPKKRIKKNSPAKDQKNEKTMKKVSPSDFFGKRTAKRVTQNSIAKNLLKKETEFHD
DKDFEETLCQLDTSKIETEFLKIGSDNTKSHVKREQVNPPEENVQTKKARQDKGSSSEQK
NNSPENMDKKTSLLEGENESKFTKVATHEKKLNLKSSKKTTDIVFEKHEPKKKEKDSGTI
DVYEERIEKKKQRAVLYNNYLQRGGARNPGSKPIPDGASNCLAGLTFLITGVLESLEREE
AEELIHKYGGRVVKSLSKKTDYMIVGDEPGASKLEKAATLGTKQISEDDLLDLIKTRPAG
KSSVVLASPRNTQRHRKRSRSPEKTDTSPSPKKICTLKETKTSPQEEKPSIPKVPESSGE
SSKKEVTTLSEPTSVTENSQLQTNVQQIALVEKYRPKTMNKIIGQHGDKSNAKKLHTWLK
NWHKNQNGSVKVSRPNPYAKNDDGGFFKACLLSGPPGIGKTTTAQVVCAELGLDLLEFNA
SDTRSKRLLKEEVSGILSNNTVTGYFSGTSSKKLSKNHVLLMDEVDGMAGNEDRGGLQEL
IALIKSSDVPVICICNDRNHPKMRTLANYTFDLRFQKPRVEQIRGAMKSLCHKENINVTT
EEIDQLIQSTNQDVRQVINQLAMLGASSNLAEKGESKTEKAKKDLRLGPWDVIRKVFSAD
DHKHMSIHDKSDLFFHDYNIAGLFVQENYLSVTPNAPKEETLIRIARTADSLAMGDLIEN
AIRGNGAWSLLPTQACFSSVIPGSLMSGRLNAQANFPSWLGRNSKRGKFDRLLQEITVHT
RLATGASKESINIDYLKQLRDTILRPLALQENDGIDEALKVMDSYHLLREDLESLVEVSL
WPGQRDPWQAIDSKVRAAFTRAYNKSSAPAPYLINAGPKKKSNQASQDEGFMEDENEDEV
SDEDQNDVDTDKMIKAKKTTASTKTASTSKTEGKTTKRGRGRGKAK
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgcagagggacataaaatcatactttaaagtgtcatcccgaggatcgactgatccaaaa
aaatccaaagcaaagaacaactcaatactctcctctgatgaagatgaaaaaaagccgaaa
acttcgagcaaagatactaaaacttcgaaaagatccacaaaaactgttattttaagcgat
tctgaagatgacactccaaaaaaacgcattaaaaagaattcgcctgcaaaggaccaaaag
aatgaaaaaacaatgaaaaaagtgtcgccttccgattttttcggcaaacgaactgccaaa
agagtaacacaaaattccattgccaaaaatcttctgaaaaaggaaactgaattccatgac
gataaagattttgaagaaactctgtgccaattagacacctcaaagatagaaacagagttt
ctgaaaataggttcggacaatactaaatcccatgtaaaaagggagcaagtcaatccacct
gaagagaatgtacaaacgaaaaaagcgcgacaagacaagggttcaagcagtgagcagaaa
aacaacagcccagagaacatggataaaaagacctctctgctagaaggtgaaaacgaatcg
aaattcacaaaagttgcaactcatgaaaaaaaactgaatttgaaaagctcaaagaaaacg
acagatatagttttcgaaaaacacgaacctaaaaagaaggaaaaagattcgggtaccatc
gatgtttatgaggaacgtattgagaaaaagaaacagcgagctgttctgtataataactat
ttgcagagaggaggagctcgtaacccgggctctaaaccgattcctgatggtgccagcaat
tgcttggctggtctcacatttttaattacgggtgttctggaatcgctcgaacgtgaggaa
gctgaagaactgatacataaatatggaggccgagtagtcaaatctttgtcgaagaaaacg
gattacatgatagttggcgacgaaccgggagcttcaaaattagaaaaggccgcgaccctt
ggaactaaacaaatatccgaggacgaccttttggatctcatcaaaacaaggcctgctgga
aaatccagcgttgttcttgcttcaccccgaaatactcagagacatagaaaaagatcaaga
tccccagagaaaactgacacgagtccgagcccaaaaaaaatttgtaccctgaaagaaacg
aaaacttctcctcaggaggaaaaaccaagcatacctaaagttccagaatcttcgggtgaa
agttcgaaaaaagaagtgacaacactttcagaacctacgagtgttactgaaaattcacag
ttgcagaccaacgttcaacaaatcgccttggttgaaaaataccggccgaaaactatgaac
aaaataattggtcaacatggtgataaaagcaacgcgaaaaaacttcatacctggttgaaa
aattggcacaagaatcaaaacggaagcgtcaaagtcagccgtccaaatccatacgctaaa
aacgatgacggtggatttttcaaagcgtgcctcttgtctggtccaccaggaattggtaaa
acaactaccgcccaagttgtttgtgctgaactgggccttgaccttcttgaatttaatgcc
tccgatacgaggagtaagagactgttgaaagaagaagtttctggaattctgtctaacaat
accgtaacgggatatttctcaggaacctcgagtaaaaaattatcaaagaatcacgtatta
ctaatggacgaggtggacggtatggctgggaacgaagatcgtggcggtctccaagagtta
atagcattgataaaaagttccgatgttcccgtaatttgtatatgcaacgatcgaaaccat
ccaaaaatgcgaaccctcgcgaattatactttcgaccttcgcttccaaaagcctcgagtc
gagcaaataagaggagctatgaaatccttgtgtcacaaggaaaacattaatgttacgacc
gaagaaatcgaccaactgatacaatcgacaaatcaggatgttcgacaagtcatcaatcaa
ttagcgatgctaggagcttcgtcaaacctcgcggaaaaaggagaatcaaaaacagagaaa
gccaaaaaggatttgaggctcggaccttgggatgtaatacgcaaagtcttcagtgccgat
gatcataaacacatgagcatacacgataaaagtgatttgttcttccacgattacaacatc
gctggcctctttgttcaggagaattatctctctgtaacacctaatgctcctaaggaagaa
acgttgataagaatagcacgaaccgccgacagtttagcgatgggagatttaatagagaat
gctatacgcggaaatggagcatggtcgctgttacccactcaggcgtgtttttcttcagtg
ataccgggctctcttatgtccggtcgtctcaatgcacaagccaatttcccgtcttggctc
ggacgaaactcgaagcgcggaaaattcgatagactattgcaagaaattacggtccacact
cgacttgctactggcgctagtaaagaatccatcaacatcgattacttgaaacaactcaga
gataccattcttcggcccctggcgcttcaggaaaatgacggcattgatgaagctctcaag
gtcatggatagttatcacttactcagagaggatttagaatctctcgttgaagtctccctg
tggccaggacagcgtgatccgtggcaagccatagacagcaaggtaagggctgcattcaca
agagcttataataaatcctcggccccggcaccttatttgataaacgctgggcccaagaag
aaaagcaatcaagcctcgcaggacgaaggcttcatggaagacgaaaacgaggatgaggtt
tctgatgaagaccaaaatgatgtggacactgacaaaatgatcaaggccaagaaaacgacg
gcaagcaccaaaaccgcatctacgagtaaaactgaaggaaaaacaacaaagcgagggcgc
gggcgtggcaaagccaagtaa
DBGET
integrated database retrieval system
