KEGG   Venturia canescens: 122416893
Entry
122416893         CDS       T09386                                 
Name
(RefSeq) negative elongation factor D
  KO
K15181  negative elongation factor C/D
Organism
vcan  Venturia canescens
Pathway
vcan03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:vcan00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122416893
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vcan03021]
    122416893
Transcription machinery [BR:vcan03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     122416893
SSDB
Motif
Pfam: TH1 TPR_Vps8 BCL_N
Other DBs
NCBI-GeneID: 122416893
NCBI-ProteinID: XP_043285943
LinkDB
Position
10:8212381..8216715
AA seq 585 aa
MPKLETMEFEDDRGGWTDDMNRGGDDPGGDDTMENPQEVLNQCLEKFKTNDYIMEPGIFT
QLKRYFQAGGNPEQVIELLSKNYTACAQMANLLAEWLILAGVKVTDVQAMVENNLKDMIV
KTFDPKKADKIFTEEGETPAWLTEMIQHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGF
QGEITSISTAAQQIEVFSRVLKTAIAGFLQNTENWQSSIQECAKMVCHGQHTYVYSQVLL
QILAQEPKGGFMMKRLSQEITKCAQQNRHDVTPITMALNGAAGNPAACLALASMLSRNTL
NPADIAILFRHYSALEPPPIELIRNPQFLELLVDALFKPGVKLNPEHKSKYIYLLAYASS
VCETTPKKSNTRKINKDELKTTIQAIEKVHNICNVNKGSTELIAELNTLYQCIRFPVVSF
GIIRWVECTVTEPSYFKLSTEHCPVHLALLDEVVSCHHLLHPKVLQLLVKLFESKQDELE
ILVQLEMKKMLIDRMVNLLSRGCVVPVVCYIKQCWQRGDTDVSLIRYFVTEVLEAIAPPY
TSEFVQLFLPMVENEEITGTMRGDSDNDLVSEFIVHCKAHCPVGR
NT seq 1758 nt   +upstreamnt  +downstreamnt
atgccaaagttggagacaatggagtttgaagatgaccgaggaggttggacggatgacatg
aacagaggtggagatgaccctggaggggacgacaccatggaaaatcctcaggaagttttg
aatcaatgcttggaaaaatttaaaactaatgattatattatggagccaggaatatttaca
cagttgaaaagatactttcaagctggtggaaatccagaacaagttattgaattgctgtca
aaaaattatacagcttgcgcacagatggcaaatcttctggcagaatggttgattcttgca
ggtgtcaaagtcaccgatgtccaggcaatggttgaaaacaatttgaaagacatgattgtc
aaaactttcgatccaaaaaaagctgacaagattttcaccgaagaaggagagactccagct
tggttgaccgaaatgattcagcatccaacttggcggtctcttatttatagattagcagaa
gaatacccagactgtttgatgctgaattttacaataaagttaatatctgatgctggattt
caaggggaaataacaagtatttcaactgcggcacaacaaatagaagttttctcaagagta
ctgaaaactgcgattgcaggttttcttcaaaacactgagaattggcaatcgagtattcaa
gagtgtgcgaaaatggtttgtcacggtcaacatacttacgtgtacagtcaagttttgctc
cagattttggcacaagagccgaaaggaggttttatgatgaaaagactttcccaagaaata
acgaaatgtgctcaacaaaaccgtcatgacgtgactccaattacgatggcactgaacgga
gcagccggcaatccagcagcttgtctcgctctcgcgtccatgctttcccgaaacacttta
aatcctgcggacatagcaattttgtttcgccattattcggctttggaacctccgccaatt
gagctcatcagaaatcctcaattcttagaattattggttgacgcgcttttcaagccgggc
gtgaaattaaatcccgaacataaatcaaaatatatttacttgctggcttatgcgtcaagc
gtttgtgaaacaactccaaaaaaatcaaacacccgaaaaataaataaagacgaattgaag
acgacgatccaagcgattgaaaaagttcacaatatttgcaacgttaacaaaggatcgacg
gagttgatagctgaattgaacacgctctaccagtgcataagattcccggtcgtcagtttt
ggcataattcgatgggtcgaatgcacagttacagaaccatcttatttcaagctgagcacc
gaacattgtccagttcatttggctcttctggacgaggttgtcagctgtcatcatcttctt
catcccaaagttttgcaattgctcgttaagctcttcgaaagtaaacaggacgaacttgag
attcttgtgcagcttgaaatgaagaaaatgttgatcgatcgtatggtcaatcttttgtcc
cgaggttgcgtcgttcctgtcgtatgttatatcaaacaatgttggcaaagaggtgacact
gatgtatcactcattcgatattttgtgaccgaagtactcgaggcaatagctcctccttat
acgagtgaattcgtccaattgtttttgccgatggttgaaaacgaggaaataactggtact
atgagaggcgacagtgacaacgatcttgtctctgaattcattgttcactgcaaagctcat
tgcccggttggaaggtga

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