Venturia canescens: 122417018
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Entry
122417018 CDS
T09386
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcan03009
]
122417018
Enzymes [BR:
vcan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122417018
Ribosome biogenesis [BR:
vcan03009
]
Eukaryotic type
90S particles
Helicases
122417018
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
TraS
Motif
Other DBs
NCBI-GeneID:
122417018
NCBI-ProteinID:
XP_043286175
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All DBs
Position
1:complement(22496615..22500722)
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AA seq
817 aa
AA seq
DB search
MGGVKEKKIKIYKKKKNIPEEKIIADLQARYENVDESKIKKFSDLPLSSKTQKALRENGY
TEPTDIQRQSIGLALRGNDILGAAKTGSGKTLAFLIPVLEILYCKRWTRLDGVGALVITP
TRELAYQIYETLRKVGQYHDISAGLIIGGKDLQFEKKRMDQCNIIICTPGRLLQHMDENP
LFDCVTMQVLVLDEADRCLDMGFETTMNAIIANLPPTRQTLLFSATQTKSVRDLARLSLK
NPMYISVHEHAEHTTPEGLQQSYVICNLEDKMAMLWSFIRHHLKQKVIVFFSSCKQVKYT
YEVLCRMRPGISLLALYGTLHQLKRMSIYESFCKKQNAVLFATDIAARGLDFPAVNWVVQ
MDCPEDTNAYIHRAGRTARFQRGGESLLVLLPSEEKMIERLKERKIPISMIKINPNKLNT
PHRKLEALLARDVALKETAQRAFVAYVKSVFLMKDKEIFDVHALNTDSYAKSLGLAIPPR
IRFLQRMQKNTTTDKSGKTKSESSQEIVRTDNKLLENKLRSRESSSEDSNDEFSHEDSNI
DRRAYLSSTESKNNLDNALFANEDSDDGEDILTVKRKNVQIEGEISDEEDEEVKLKNSKN
KKAVTKAAMAKKILRKKIVPNKKTTFDEDGQELLDSAKTKVSELARQYENEESSGINIEM
AKKILREEDRFDKKRFQAKIREKHKEEKRKLKANKKVVESDEDENEVDDERGGVKLADYV
SESEAEEPDLSWLPDPDEIYGPKKGSDEEQSGKSSADDDDDDDDDNDEEYENVHRPPKRK
LVTQEEFKKSKKKQKFQMKENSDLQATEELALQLLRD
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgggtggcgttaaagagaagaaaattaagatttacaagaaaaagaagaacataccggag
gagaagataatcgctgacttacaagcccgttatgaaaatgtcgacgaatcgaaaataaag
aaattcagcgatttacctctatcatcaaaaacacaaaaggctttacgagaaaatggttat
acagaaccaacggatatacagagacagagcattggtctggctttgcgaggaaatgatata
ttaggagcagctaaaactgggagtgggaaaacattagcatttctgattccggtgttggaa
atcttgtactgcaagagatggacacgcttggatggtgtaggagctcttgttataacacct
acccgagagttagcttaccaaatttatgaaacattgcgcaaagttggtcaatatcacgac
atttctgctggtttgataatcggtggcaaagatttgcagtttgagaaaaaacgtatggat
caatgcaatatcattatttgcactccaggtcgtcttcttcaacatatggatgaaaatcct
ctatttgattgtgtaacaatgcaagttcttgtattggacgaagctgacagatgtctcgat
atggggtttgagaccactatgaatgctatcattgctaatctaccgccgactcgacaaact
ctactgttttcagccacgcaaacgaaatctgtacgagatttagcaagattgagtttgaaa
aatccaatgtatatatcagttcatgagcatgccgagcacacaaccccggagggtcttcag
cagagttacgttatttgtaatttagaagataaaatggcaatgctctggtcattcataagg
catcatctcaaacaaaaagtgattgtattcttttccagttgtaagcaggtgaaatacacg
tacgaagtactctgtcgaatgagaccgggtatcagtcttctagcactgtatggaacgctg
catcaattgaagcgtatgagcatttatgagagcttctgtaaaaagcagaacgccgtttta
ttcgcgaccgacattgctgcacgcggtctagattttccagctgttaattgggtcgtacag
atggattgtcccgaagatacgaatgcgtatatccatcgagctgggcgtacagctagattt
cagagaggtggtgaatcccttctcgttcttctgcccagtgaggaaaaaatgattgagaga
ttgaaggaacgaaaaatacccatttctatgatcaaaataaatccgaacaaactgaatact
ccacatcgaaaactcgaagctctgctcgcccgtgatgttgctcttaaggaaacggcgcaa
cgtgctttcgtagcctacgtgaaatcagtattcctgatgaaggataaagaaatttttgac
gttcacgctctcaatacggattcttacgctaaatctttagggctggctatacctccgagg
attcgttttctgcaaagaatgcagaaaaacacgacaacggataaatctggaaaaacaaag
tctgaaagttcgcaagaaatagtcagaacggacaataaattattggaaaataagctgcgg
agtcgagaatctagcagtgaagattccaatgatgaattttcccatgaggattcgaacatt
gatcgacgagcatatctatcatcgacagaatcgaaaaataacctcgataatgctttattt
gcaaatgaggatagtgacgacggtgaggatattttaaccgtgaaaagaaagaatgttcag
atagagggtgaaatatccgatgaagaagatgaagaggttaagctgaaaaattcgaaaaac
aaaaaagcagtgacgaaagctgcaatggctaaaaaaatattgagaaaaaaaatagttccg
aacaaaaagacaacttttgacgaagatggtcaagaacttttggactcggcaaaaacgaaa
gtgtcagaactcgcgaggcaatacgaaaatgaggagtcatctggcatcaacattgagatg
gccaagaaaatcctccgggaagaggatcgtttcgataaaaaacgattccaggcaaagata
agagagaaacataaggaggaaaagcgaaagcttaaagcaaacaagaaagtggtggaaagt
gatgaggatgaaaatgaggtggacgatgagcgaggaggagttaaattggctgactatgtg
agcgagagcgaagcggaagagcccgatctttcctggcttccagatccggatgaaatttac
ggtccaaaaaagggttcagatgaggagcaatctggaaagtcttcagccgatgacgacgac
gacgacgacgacgacaacgacgaagagtatgaaaatgttcacagaccgccgaagaggaaa
ttagtgacgcaagaagaattcaagaaatcaaagaaaaaacagaaattccaaatgaaagaa
aacagcgatttgcaagcgaccgaagagttggcgctgcaattgctacgagattga
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