KEGG   Venturia canescens: 122417123
Entry
122417123         CDS       T09386                                 
Name
(RefSeq) HBS1-like protein
  KO
K14416  elongation factor 1 alpha-like protein
Organism
vcan  Venturia canescens
Pathway
vcan03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:vcan00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    122417123
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcan03019]
    122417123
Messenger RNA biogenesis [BR:vcan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     122417123
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 HBS1_N MMR_HSR1 SpoIVA_ATPase AAA_22
Other DBs
NCBI-GeneID: 122417123
NCBI-ProteinID: XP_043286328
LinkDB
Position
10:complement(17432048..17437079)
AA seq 688 aa
MSRHRDVRSMKYSDEYDGYDDVYGHSVDDDYNVSPEAEEFLFDRNKQQNISSFLVEPAVA
KSNESVESKEQAPNKAERAALSEKENAQLKVCMETVRNVIGDSVLEEVLVEKVIQHNFNA
EAVLNDVLNETPPKETSMAKEHLEAHAGIKQNLKTPNKLPPATMIRVTPAATRSVIKGFE
VKNSENSDLLNTPRVQSPASDRSSPGSRRKEELLPKKWPTSKPNTPRCQSPISGRATPEN
ETRKSHEDKRDVTAIYKDKRGDSKDQLHLVVVGHVDAGKSTLLGRLLCDLGYVPSKLMHK
YQRESKKIGKQSFAYAWVLDETGEERERGITMDVGYSKFETETKSVAILDAPGHRDFIPN
MIMGATQADVALLVVDATRGEFESGFDSGGQTREHALLLRSLGVSQLAIVVNKLDTVDWS
KERFDEIVEKLSLFLKQAGFKETVTFVPCSGLSGENLIAKPTAEGLSSWYNGPTLLSVID
RFKCPERPISKPFRFSVNDIFKGTGSGFCVSGHIETGMVAVGDKVLLLPANQTAVIKGIL
ADETATSNGFAGDHVSLTIAGIEQQNVAVGDVICSISNPVPVTTCFQAHVVIFSATVPVI
KGLPVILHQQSLVEPATITKLIAQLHKSSGEVIKKKPRCLPKNCSAIIEVQTQRPVPMEL
YRDIEQLGRVMLRVSGVTVAAGLVTKIN
NT seq 2067 nt   +upstreamnt  +downstreamnt
atgtcacgacacagagatgttcgttctatgaagtattctgatgagtatgatggctacgac
gacgtgtatgggcattctgtcgacgatgattacaatgtttcgccagaagctgaagagttt
ctctttgaccgcaacaagcaacagaacattagttctttccttgtcgaacctgcagtagcg
aaaagcaatgagtctgtggaatcaaaagaacaagctccaaacaaagcagaaagagctgca
ttgtccgagaaagaaaatgcccaattgaaggtttgcatggaaactgttagaaatgttatt
ggcgattccgtcctcgaagaggttctcgtagaaaaagtaattcaacataatttcaatgct
gaggctgtattgaatgacgttttaaacgaaactcctccaaaagagacgtccatggctaaa
gaacatctggaagctcacgcaggtattaagcagaatttgaaaactccaaataaattgcca
cctgcgacaatgataagagtcactccggcggcaactcgctcggtcatcaaaggttttgag
gttaaaaactcggaaaattcggatttattgaacaccccccgagtccagagtccagcatct
gacagaagttcaccaggttcgagaaggaaggaagaacttttgccgaaaaaatggcccact
tcaaaacccaacacgcctcggtgtcaatcaccaatttccggtcgagctacacccgaaaat
gagactcgaaaatcccacgaagacaaacgcgacgtcacagcgatttacaaggacaaacgc
ggtgactccaaggatcaattgcacctcgttgtcgtcggtcacgttgacgccggaaaaagc
acccttcttggcagactcctttgcgatcttggatacgttccttcaaaactcatgcacaag
tatcaacgagaaagcaaaaaaattggaaaacaatcgttcgcctatgcttgggtccttgat
gaaactggcgaagaaagggaacgaggaatcacaatggacgtgggatactcgaaattcgag
acggaaacgaaatctgtggcgattctcgatgcgccaggacatagagacttcataccgaat
atgataatgggtgcgactcaggccgacgttgctcttctcgtcgtggatgcgacgagagga
gaattcgaatcaggttttgacagtggaggacaaacgcgagaacatgctctgctccttcgg
tctctcggtgtttcacaactggctatcgttgtgaacaaacttgacaccgtcgattggtcg
aaggaaagattcgacgagattgttgagaagttgagtttatttttaaaacaagcaggtttc
aaagaaaccgttacttttgtaccttgcagtggattgtccggagaaaatctgattgccaaa
cccacagcagaaggattatcgagttggtacaacggaccaacgttactcagcgtcatagac
cgtttcaaatgcccggaacgtcccattagcaaacctttccgattttctgtaaatgatatt
ttcaagggcaccggctcaggcttctgtgtttccggacacattgaaacaggcatggtcgct
gtgggtgataaagttttgttgctgccagcaaaccaaaccgctgttatcaaaggaattttg
gccgacgaaacagcaacgagtaacggtttcgctggagaccacgtgtctttaacaattgct
gggatagagcaacaaaatgtggcggttggtgacgtgatttgcagcatctcgaacccggtc
ccggtgaccacgtgttttcaggcgcacgtggttattttttcggcaacagtaccagtgatt
aaaggcttaccggttattttgcatcagcaatcgctagtcgaaccagccacgatcaccaaa
ttaatcgctcaattacacaaaagtagcggcgaagtaataaaaaagaaaccacgctgtttg
cccaaaaactgcagcgccattatcgaagtgcaaacccaaaggcctgtgcccatggaattg
tacagagacattgaacaattgggcagagttatgctacgcgtttccggtgtaaccgttgcc
gctggccttgttaccaaaatcaattag

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