Venturia canescens: 122417168
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Entry
122417168 CDS
T09386
Name
(RefSeq) nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
vcan
Venturia canescens
Pathway
vcan03013
Nucleocytoplasmic transport
vcan03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122417168
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122417168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcan03019
]
122417168
Messenger RNA biogenesis [BR:
vcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122417168
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
122417168
NCBI-ProteinID:
XP_043286408
LinkDB
All DBs
Position
10:complement(18494025..18500949)
Genome browser
AA seq
1576 aa
AA seq
DB search
MAKRSNNSLGRRSYGGKPYDANNSFVKKMATKVTDLIPQRFSKWFSPQDSDDASNQDPDL
INGEEETRQPPAKRPRIRMDVTHPPGTFSIKTLDKNQTESHESPVDNGNGEFVLEPTAAG
SSDVCKMVSSTPVVPEARNSKCRRPQEITRLATTNNGGSNGVDDNSESGESTSGCSSLIP
QTNRQEGASNLSYGSNVPGGRNRPTDDKSSFANHLQSPRCLFLTSGGSRDSLSSRRPSFN
ASIMSNNGNNMERSSALSSPFYSGNVTFGGANAVSNYKRSRSLFNSGNEFQLKVPRRTSV
RVKPSNVESIDASGMSQTAKRILEAMEYFSSPISDAKKIPMKQLSVTPGGTKRPREERTN
STGPPTRVGLRHLTKELAVPTVPEMLKLRRRQKLQDTTVAARKIISAKSGPALSSSWFAT
ETPTTEDYQLRTEVDHTWKHQGKMRTRNRNPKEEGPVPRVNLPSISLPITSLPSFEPLPE
YTAPTIPSNRNNKEETDDSNNFKFASPIKMSETSWNVKSINNFSFSKPINANETSQSSKD
SNSGSRDSMDSKSNESSGVAMNFMWSGSSTAPRLKVKTKQNEPIDKKIDNTVLFGNSPVK
EMTKLKSVTVDSGLSSFDQSSSVEIWECSECYIKNDSKENSCIACKASKPRSTGVKEIPE
DAKRLSPAKNIPTNMNFGAQFKMSSDQWECKACLVRNQATSVKCVSCTSPKPSSGVSKNS
NSSNSSTIPTGFDFPEKFKPAEGSWECPGCMLRNPDLVITCPCCSASKPSLIKNLPKKTS
LEDESTRNLNRNEEGTPDDAKLMDKFKPAPTSWECSSCLVRNSETANACVCCATSKPGAP
ISAKSVKEETAPVLPQSNWSEKFKKPAGSWTCDSCMLQNKAETTECVACNAVKPGAAPKP
QTSSKFTFGVSGSNNGGFKFGLDKADVKSTWGSGSEIANGFTFGAKSAVTDSNPGQFKFG
IPRETEKTEAAKVPVNASGFVFASPKSAKDNSPKSETKGNDKSNESDDTTVTGEKKNLMP
FVFGVPKSVRKRSVDNALLETSKEQVAEISTKARVAEAQFVFGIPKSSESSTNDTKLRFE
ASTSEKPLIFGNQTQQITSHDSNAINPLESVSSQEQSETSVSSSNTTSTTNTSERLPRTS
FPFSEPKSKMASQTAVLGFKRNSVEASSSVFSVSGSSVVRDASADSSANKTATPSFGVTN
SIAPSTGFGLAASSASSSALIADTSAGESKNCFAPAADKPKSFFGISGEKNPPVFGGTNE
KNSQIFGNPENKLTPTFGTTDKPITPGAMFNSTPASSFGANAAVAPQPVFWTTTAPPVFG
SNAAAPSFGAGNSVGTNIFASAGKSNNAAPTSTNNPGLFTFGGANNQTIPSQTTPSTFSF
ANENAGTVSSAVKPIFAFGNSSNTSQPNPNECFGTPATNTGTFGSSAATVTNPAPSPFTY
NAPAAKQDPPLFGQTSAPIPSMFGTQPTASGLGQQANAPPTFANNAPPSSTGFTFGAAPP
ATGGFNFGGGMAQQAPVSSGGFNFNAPSPSPAIAFDPNTRPSFNFTGGTAPTAFNATPQP
VTARKIKKAVRRMQQR
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaggagcaacaattcattgggaagacgctcgtacggcgggaaaccatatgat
gcaaacaactcattcgtcaagaaaatggccactaaagtcacagatctcattccacaaaga
ttcagcaaatggttttctccgcaagatagcgacgacgcatcgaaccaggatccggatttg
attaacggagaagaagaaacacgacaaccacctgccaaacggccaagaattcgtatggat
gtcactcacccgccgggaacattttccatcaaaactcttgacaagaatcaaactgaaagt
cacgaatcaccggttgataacggaaatggtgaatttgtcctcgagcccacagctgcagga
tccagtgacgtgtgtaaaatggtatcatcgacgccagttgtgcccgaagcaagaaactcc
aagtgtcgcagacctcaagaaataactcgtttagccacaacgaataatggtggaagcaac
ggcgttgacgacaattccgagtctggtgagagtaccagtggctgtagttccctcattcct
cagacaaataggcaagagggagcttcaaatttgtcatacggttctaatgtgccgggagga
aggaatagaccgacggacgataaatcctcttttgcgaatcatctacaatctccgcgttgc
ctgtttctgacaagcggtggtagcagagattctctgtcgagtagacgtccaagtttcaac
gcttctataatgagcaacaacggtaacaacatggagcgttcatccgcactctcatcgccg
ttttacagtgggaacgtaacattcggtggtgcaaatgcggtcagtaattacaagcggagt
cgttcgttgttcaacagtggaaacgaatttcaattgaaagtgccacgaagaacgagcgtt
cgggtgaagccgtcgaacgtcgaatcgatcgacgcttcaggaatgagtcaaacggccaag
agaattctcgaagcgatggaatatttttcgtccccgatatcggatgcgaagaaaataccg
atgaaacaactttcggtaactccgggtggaacgaagcgaccgcgggaggagagaacgaat
tcgacaggcccgccgacgagagtcggactccgtcatttgacgaaggaactcgctgttccc
acagttccagaaatgttgaaacttcgaaggaggcaaaaattacaagacacgacagtcgct
gctcggaaaattatttccgccaagagtggcccggctctgtcttcctcttggttcgcaacg
gagactccgacaaccgaggattatcagttgagaactgaggtcgatcatacgtggaaacat
caagggaaaatgcgcaccagaaacagaaatcctaaggaagaaggcccagtgccgagggtc
aatttgcccagtatttctcttcccataacctcgctaccgagtttcgaacctctcccggaa
tatacagcacccacgatcccttcgaatcggaacaacaaagaagaaactgacgattcgaac
aatttcaaattcgccagtcccataaaaatgagcgaaacgtcttggaatgtcaagtcaatc
aataactttagcttcagtaaacctataaacgctaacgagacgagccaatcttccaaagac
agtaattccgggtctagggattccatggattcgaagagcaacgaaagcagcggcgtcgcg
atgaatttcatgtggtcaggttcctcgacagccccgagattgaaagtcaagacgaagcag
aacgaaccaatcgacaaaaaaatagataatactgtactctttggcaattcaccggtgaaa
gagatgaccaagttgaagtccgtaaccgtcgattcaggactatcgtcgttcgatcaaagt
tcgagcgtcgaaatttgggagtgctctgaatgttacataaaaaatgattcgaaagagaat
tcctgtatcgcttgcaaagcttcgaagccacgatcaactggagttaaggaaataccggag
gatgcgaaaaggctatcgcctgcgaaaaatatccctacaaatatgaatttcggagcccaa
tttaaaatgagctccgatcagtgggaatgcaaagcttgtttggtgagaaatcaggcaacg
agtgtgaaatgtgtatcgtgcacgagtcctaagccatcatcgggtgtttcgaagaacagt
aattcctcaaattcatcgacgattccaacgggttttgatttccctgaaaagttcaaaccc
gcggaaggttcctgggagtgtccgggttgtatgcttagaaatccagacttggtcataacg
tgtccgtgctgcagcgcctcgaagcctagcttgattaaaaatcttcctaagaaaactagt
ctcgaagacgaatcaacgagaaatcttaaccggaatgaagaaggaacgcctgacgatgct
aaattaatggataaattcaaaccggctccgacgtcctgggagtgttcctcttgtttggta
agaaattctgagacggcgaacgcttgcgtttgttgcgcgacatcgaaacccggcgcaccg
atctcggcaaaaagcgtcaaagaagaaacggcgccggtgctgccgcaatccaattggagc
gaaaaattcaaaaaacccgctggaagttggacttgtgactcgtgtatgctgcaaaacaaa
gccgagacgaccgagtgcgttgcttgcaacgccgtgaagccaggagctgcgccaaaaccg
caaacgagctcgaaattcacgttcggagtgtccggatcgaacaatggtggtttcaaattc
ggcctggacaaagccgacgtcaaatcgacatggggctcgggcagcgaaattgccaacggt
ttcacgttcggagctaaatctgctgtgacggacagtaatccgggacaatttaaatttggg
atccctagggaaactgagaaaactgaggcggcgaaagtgccagtaaacgccagtggcttt
gtcttcgcttctcccaaatctgccaaggacaacagcccgaaatctgagactaaggggaac
gataagtcaaacgaatcggacgacacgactgtcaccggcgagaagaaaaatcttatgcca
ttcgttttcggcgtgccgaaatctgtaaggaaaaggtcagtcgataatgcgctgctcgaa
acttcgaaggagcaagttgcggaaatatccacgaaggcgagagttgccgaggctcagttt
gtttttgggattccgaaatcgagtgagagttctactaacgatactaaattgagattcgag
gcgtcgacaagcgaaaagccattgatttttggaaatcagacacagcagattacgagccac
gattccaacgcgattaatcccttggaatcggtgagcagccaggaacaatcggaaacgtct
gtttcatcctcaaacacgacctcaactacgaatacttctgagcgattgcctcgtacgtct
tttccattctcggaaccgaaatcaaaaatggcgtcgcaaactgcggttctcggcttcaaa
cgaaactctgttgaagcctcaagttccgttttttcagtaagcggaagttcagtcgttcga
gatgcgagcgctgattcatcagccaacaaaacggcaacgccaagtttcggcgtcacgaat
tcaattgctccgtcaaccggtttcggactcgccgcgagttctgcctcgtcttcagcattg
atcgccgatacttctgccggtgagtcgaaaaattgttttgcaccagcagctgacaaaccg
aaatcgtttttcggtatttccggagagaaaaatcctccagtttttggtggaacgaatgag
aagaacagccagattttcggcaaccccgagaacaaattgaccccgacattcggcacaact
gacaagccaatcacccccggggccatgttcaattctactccagcgtcgagcttcggagca
aacgcagctgtggccccgcaacctgtcttctggaccacgactgctcctccggttttcgga
agcaacgcggcagctccgagttttggggctggaaacagcgtcgggacgaatattttcgca
tcggctggaaaatctaataacgccgcaccaacttcaaccaataacccaggactttttact
ttcggcggggctaataatcaaacaattccaagccaaacgactccgagcactttttcgttt
gctaacgagaatgcgggtaccgtgagctcagcggttaagccgattttcgctttcggcaac
tcttccaacacttctcaacccaatcctaatgaatgtttcggaacacctgcgaccaacacc
ggaacttttggctcttctgccgcgacggtcaccaaccccgcaccttctcctttcacctac
aatgctccggctgctaaacaagaccccccactttttgggcaaacttcggctccgattccc
agtatgttcggtactcaacctaccgcttcaggcttgggacaacaggctaatgctcctcct
actttcgcaaataacgctcctccgtcttctaccggattcacctttggagctgctccacct
gctaccgggggtttcaatttcggcggtggaatggcgcaacaggcaccagtttcatccgga
ggtttcaacttcaacgcgccttctccttcaccagccattgctttcgatccaaacacacgg
ccgtcttttaacttcaccggtggaacagcaccaaccgcttttaacgcaacaccacagccg
gtaacagcgagaaaaatcaagaaagctgtgagaagaatgcaacaacgatag
DBGET
integrated database retrieval system
