Venturia canescens: 122417177
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Entry
122417177 CDS
T09386
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
vcan
Venturia canescens
Pathway
vcan03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122417177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcan03021
]
122417177
03036 Chromosome and associated proteins [BR:
vcan03036
]
122417177
Transcription machinery [BR:
vcan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122417177
Coactivators
SAGA/TFTC/STAGA complex
122417177
Chromosome and associated proteins [BR:
vcan03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
122417177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
SAGA-Tad1
VPS13_N
TAF
Motif
Other DBs
NCBI-GeneID:
122417177
NCBI-ProteinID:
XP_043286433
LinkDB
All DBs
Position
10:complement(10786530..10797173)
Genome browser
AA seq
1055 aa
AA seq
DB search
MASAKFLEEALSTDVDESAVNAIVGSLETQLVTSSPVTGINTSGTIVNSHQNNQLTGNGI
SNGGTITAVQQQQQQQQQLKHGVANGGGATSVNSLMNQDINKSIITTSSLAPVNVTSNAI
TTNQQQQQQQQQQQQQQQQQQQQQQQQQQQKQQQQQQQQQHNSLVSTTSYGNQSANQTTT
NQSIGTLAKSHESVKIIYPSSGQVITAGVVNNKISFPAQTVGQLPNGTLGVVTTQAVLQQ
TASNVTNVGSGTQTSCQTIGTSKQSGTALVIKTSVAQGGMVSVPMSVAGSLGTSVTNTTL
HSNLQGKGGMASTIVPSNVQILNVNAMRPGTPVGNQQGGKQVAPRVVIGPHIVGTRPGGP
GQITLQALHGLQPGAQGHLIVKTENGQYQLLRVGPAPTAGNQGGGNVTPNSISGNTVVGQ
NAGTTTTYRLASVPAVSRLNTQFTGPPLATLRKPVQTVAASVSTPTVVVTPSTVTATPTA
TPTTTVTPPTVAVQAAHTPAQRQTTDNTKEKCRRFLANLLELSSREPRAVERNVRTLIQE
LIDTKVEPEEFCDRLEKLLNASPQPCLIGFLKKSLPLLRQSLVTKELVIEGIKPPPANVV
FSIASVTPTIQQSNQLRPTVAVAASQISTSTVPAVTPVRVMAPPVAAAPTVVRPPQPVQQ
RMIRPVTTIVRTPATYGIKSTVAIAGVRPPTPHVQHKAAVAAVVAASTAVATSTPSQVPV
QVSLPSPAPPAPAPPPPPPNIVTPVTAVTTTTAPVVVTKVVTTMQSKTVNTATTINKTIV
PSLVPKPTAKEKEKKTFSSAGYTGDDDINDVAAMGGVNLAEESQRILGSTEFVGTQIRSC
KDEVFLHLSPLQQRIKQIVSSYGLEEPNQEVAALISHAAQERLKNLVEKLAVIAEHRIDL
IKVDPRYEVTQDVRAQLKFLEELDRVERRRHEEQERELLLRAAKSRAKTEDPEQAKLKAK
AKEMQRAEMEELRQREANLTALQAIGPRKRPKLDVTGSATSQSSNSGTNASSSGINRQMS
MRPRLKRVNFRDLLFLLEQEKETCRSTTLYKSYLK
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggctaagtttcttgaagaggctctcagtacggacgtcgacgaatcggcggta
aacgcgatagtgggctcactggagactcaacttgtcacgtcgagtcctgtgacgggaata
aatacaagcggtacgattgtaaatagtcatcagaataatcaattgacaggcaacggtata
tcgaacgggggcaccatcactgctgtacaacagcagcagcagcagcagcagcaacttaaa
catggtgttgcgaacggtggcggtgccacttctgtaaattcactaatgaatcaagatata
aataagtcaataataacaacgagttcacttgcgccggtgaacgtcacgtcgaatgctata
actacgaatcagcagcagcagcagcagcaacaacaacaacaacagcagcaacaacagcag
caacaacagcagcaacaacagcagcaacaaaaacaacaacaacagcaacaacaacaacaa
cataatagtttggtatcaacgacatcgtacgggaatcagagcgctaatcaaacaacgaca
aatcaatcgataggaacattggccaaaagccatgagtcagtgaaaataatatatccctcc
agcgggcaagttatcactgctggcgtggtaaacaacaaaatatcatttcccgcccaaacc
gtaggacaattgcctaacggcaccctaggagttgttaccacccaggcagtgctccaacaa
accgcttccaacgtcactaatgttggatccggtacccaaacctcttgccaaacaattggg
actagtaaacaatctggaacagcgcttgttattaaaactagtgttgcacaaggcggcatg
gtttctgtacctatgtctgtcgccggatctcttggtaccagtgttaccaacaccacgctg
cactcaaacctccagggtaaaggcggtatggcttctactattgtgccgagcaatgttcaa
attttgaacgttaatgccatgcgacctggcactcctgtgggaaatcaacaaggtggcaaa
caagtcgctcctagagtcgttattggacctcatatcgtcggaactagacctggtgggcca
gggcagataactctccaggctctacacggacttcaacctggtgcacaaggacacttgata
gttaaaacagaaaatggacaatatcaattactaagagtcggtcctgcaccaactgctggg
aaccaaggtggaggaaatgtaacacccaacagtatcagcggtaacacagttgtaggacaa
aatgctggcacgacaacaacctatcgtctagcctctgtgccggctgtaagtaggctgaac
acacagttcactggtccaccactcgccaccctaagaaaacctgttcagacggttgcagca
agtgtatcgactccgacagtggtggtaacgccttcaacagtaacagcaactccaacagcg
actccaacaacgactgtaacacctccaacagttgctgtccaagctgcacacacgcctgct
cagcgtcaaactacagataataccaaagaaaagtgtcgtagattcttagcaaacttatta
gagttgtctagtcgggaacccagagcagtggaacgaaatgttcggacgttgatacaagaa
ctaattgacacaaaagtagaacctgaagagttttgcgatagactggaaaagttattaaac
gcttcaccgcagccatgcctgattggttttttgaaaaagagtttaccacttttgcgccaa
tccctggtcacaaaggaattggtcatcgagggcatcaaacctccgcctgcgaatgtcgtc
ttttctatcgcctctgtcaccccgacgattcagcagtcgaatcagttgaggccaactgtg
gctgtagcggcgagtcaaatttctacaagcacggtacctgccgttactcctgtccgagta
atggcaccaccagtcgcagctgcgccaaccgttgtacgtccacctcagcccgttcaacaa
agaatgattcgacctgttacgacgatagtacgcactccagcgacttatggcataaaatca
acagtcgcgatcgccggtgtgcgaccaccgacgcctcatgtacagcataaagcagcagtg
gctgcagtagtcgcagcaagcactgctgtagcaacctcaacaccatcgcaagttccagtt
caagtatcattaccgtcacctgcaccaccagcaccggcgccacctccgccacctccaaat
atcgtaacaccggtcaccgccgtcactacgacaactgcccccgtcgttgttaccaaagtc
gtcacgacgatgcagagtaaaaccgttaataccgccactactattaacaaaaccatcgtg
ccttctcttgtaccaaaaccaactgctaaagagaaagagaaaaaaactttttcatcggca
ggatatacgggcgacgacgacataaacgatgtagctgctatgggtggggtcaatcttgct
gaagaatctcaaagaattcttggctcgacggagttcgttggtacccagatcaggtcttgc
aaagatgaagtcttcttacatttgtctccgctgcagcagaggattaagcaaatagtatct
agttatggattggaagaacccaatcaggaggttgctgcactaatatcgcacgccgctcag
gaaaggttgaaaaatttagtagaaaaacttgcagtcatagcagaacataggatagatctc
ataaaggtggatccgcggtatgaagtgacgcaggacgttagagcacagctcaagttttta
gaagaattggacagggtggagcgcagaaggcatgaagaacaagaacgagaacttcttcta
agagcggccaaaagtcgcgcgaaaacggaagatcctgaacaagccaagctcaaagcaaaa
gctaaagagatgcaaagagcggagatggaagagttaagacaaagggaagcgaatttgacg
gcgttgcaagcgataggaccgcgaaagaggccaaagttggacgtgacgggatcagcaacg
agtcaatcgagcaatagtggtacgaacgcatcgtcgtcgggtataaaccgtcaaatgtcg
atgaggccgcgactgaaacgtgtgaattttcgggacttgttgtttctccttgaacaagaa
aaggaaacgtgtagaagcacaactttatataaatcttatctaaagtga
DBGET
integrated database retrieval system
