Venturia canescens: 122417367
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Entry
122417367 CDS
T09386
Name
(RefSeq) iroquois-class homeodomain protein irx-5 isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcan03000
]
122417367
Transcription factors [BR:
vcan03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
122417367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Pes-10
Motif
Other DBs
NCBI-GeneID:
122417367
NCBI-ProteinID:
XP_043286748
LinkDB
All DBs
Position
10:complement(17930637..17952029)
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AA seq
742 aa
AA seq
DB search
MSQFSYRGSPNLQCPAVTTVSGSSLASSSPSPAATVKSLLSGNGAGASAGSASSSVSGLH
QLSGVQQQSGRMAVTSGVVRPAPGSPTSSVSPSQPGHGVTATATSSGGGPTGGRCCDTGR
PLFTDPISGQTVCSCQYDIIGGYGRLGGLPPSALSMYSAPYAAAAAAAASEGITAYFPSL
GAEQPPFYTSTAAGLEGLKDNLGAGAAAGWPYPSVYHPYDAAFASYPFNGYGMDLNGARR
KNATRETTSTLKAWLNDHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKM
TWEPRNRVEDEDNNNDDDDSGRKSVDDKDRLADSKDSGTGSSEDGERPAHRLDLLHGGSG
GPGMLQGRTESEWSESRADSGPDSPECLYDQREPRHPLHLHQQQQQQHQHQHQHQQQQQQ
QQHSHHHHQLHQHGHSQHHQSHPAFLGAGIGGGGSTRLLRHGSPDGTSPHGGMSQVLGVT
SHHLGGSTGSAVASSVGNTGVVQPTKPRIWSLADMASKDGEHHSPSVAALSGLSSVYAGN
AAGAGGGNGGGKIVSPLASRLQPHHPLHPAMHAVGQFVRPHPDFYRNFYGASHLSAGADM
SLLETYSRTLGGLGGVIAPSGGAPPGMSSSTVASSVAAAAAAAAAAAAAAATSGGGASSS
SSSSTSSNHKSFAINGSAGSNPTNVASGTGGGGGGGGGVLLTTVSSGISPSSSSSASSGG
SDQSPHPANSHPPSELKSPGRV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagttctcctacagaggatcaccgaacttgcagtgtcctgcagtgacaacagtg
agcggatcgtcgttggcctcgtcgtcaccgtcgccggcagcaacggtcaaatcattgctg
agtggtaacggcgcgggcgcgagtgccggaagtgcgtcgagtagcgtaagcggattgcat
caattgagcggcgtgcaacaacaatcgggaagaatggcagtcacgagcggagtagtcagg
ccggcgccggggagtccgacgtcctcggtaagtccgtcgcaacccggacacggagttacc
gcgacggcaacgtcttccggcggtggtccaaccggagggagatgctgcgacaccggccgg
cccctcttcaccgatccgataagcggccagaccgtttgttcttgtcaatatgacattatc
ggaggctatggacgactcggtggcttgccaccgagtgcgttatcgatgtacagcgcacct
tacgcggcggcagctgccgccgcagcgtccgagggtattaccgcctactttccttccctc
ggggctgaacaaccacctttctacacgtccacggcagcgggactggaaggattgaaggac
aacctgggagccggtgccgcagcgggctggccgtacccatcggtttaccatccttacgac
gcagcgtttgcaagctatcccttcaacggttacggaatggatttgaacggagcgagacgg
aagaacgcgactcgagaaacgacgagtactctaaaggcgtggctcaacgaccacaagaaa
aatccttatccgacgaagggtgagaaaataatgctcgcgataatcacgaagatgacgctg
acccaggtgtcgacgtggttcgcgaacgctcggagacggctaaaaaaggagaataaaatg
acgtgggagccgcgaaaccgggttgaggatgaggacaataataatgacgacgatgacagc
gggagaaagagcgtcgatgataaggatcgattagcagactcgaaagattcgggaaccggt
tcgagcgaggacggtgagaggccggcgcatcgtttagatctgctgcacggaggctcggga
ggtccgggaatgttgcagggtagaactgaaagcgagtggagcgagtcgcgggccgatagc
ggtcctgatagtccggagtgcctgtacgatcaacgggagccccgccatccgctgcatctc
catcagcaacaacagcagcagcaccagcaccagcaccagcaccagcagcagcagcagcag
cagcaacattcgcaccatcatcatcagcttcatcaacacggacattcgcagcatcatcag
tcgcatccggcgtttctgggtgcggggatagggggcggaggtagcacgcgtttgttgcgg
cacggatcacccgatggaacttcgcctcacggaggaatgagccaggttttgggtgtaacg
agtcatcatttgggaggaagcacgggaagcgcggtggcctcctcggtcggcaatacgggg
gtggtgcaaccgacgaaaccgcgaatctggtcgttagcggacatggcgagtaaggacggg
gagcatcattcgccgagcgtcgccgcgttgagcggtctttcctccgtttacgcgggaaac
gcggccggagctggaggcggcaacggaggcggaaagatcgtgagccctctggcgagtaga
ctgcagccccatcatccgttgcacccggcgatgcacgcggtcggccaattcgtccgcccg
catccggacttttatcgtaatttttacggagcctcgcatctcagcgctggcgctgacatg
tcactcctcgaaacgtattcgagaacgttgggcggtcttggcggagtaatagccccgtcg
ggtggtgcaccaccgggtatgtcctcgagtacggtagcctcgtcggtagcggcagccgcg
gctgcggcggctgcagctgcggcagcagcagcgacctccggcggtggggcctcgtcgagc
tcatcttcgtcaacctcaagtaatcataaaagtttcgcgataaacggcagcgccggttcc
aatcctacgaacgtggcgtccggtaccggcggaggaggaggaggaggaggaggcgtgctg
ttgacaacggtgtcatcgggaatatcgccctcgagttcgtcatccgcgtcctccggagga
tcggatcagtcgcctcacccagcgaacagtcatccaccgtcggagctcaagtcacccgga
cgagtgtga
DBGET
integrated database retrieval system
