Venturia canescens: 122417368
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Entry
122417368 CDS
T09386
Name
(RefSeq) homeobox protein caupolican-like isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcan03000
]
122417368
Transcription factors [BR:
vcan03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
122417368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
122417368
NCBI-ProteinID:
XP_043286750
LinkDB
All DBs
Position
10:complement(17978195..18025752)
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AA seq
704 aa
AA seq
DB search
MSAYAQFGYSYPSASQLLVSGGQPTTATSPAMSSGGGLSPGALSPSSTATTTTTTGGAGG
TGTGAGTPGGATGGGASTPVGSGGPPGTACCENGRPMMTDPVTGQTVCSCQYDSAARLAL
GAYPRLAPSATSYSSYPTPTPSATDQTPYPSIGMDSSAFYSPLGNPYGLKDATGMGMTAD
MGSAWGTAALQPAATGYYPYDPTLAAYGYGAGYDLAARRKNATRESTATLKAWLNEHKKN
PYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDAVLTDSED
NKDKEDSVADSRSDRVGDEARRNIDDNEPMRHVKAEHLQHDKDLEDDDDLDLEDDHHRRP
ELSFHHTIQQQQQLHHHHHHHHQGYEDHLKDEVVKSECGVVGGVPIPATKPKIWSLADTA
ACKTPPPTHPHHQQYQVHQHHQHYGLQQHQQHHQHHQLQHQHQHPHQHHHHQQHQQQQQQ
QQQHQHHLAAQGHHQSQQPWLGTSGGAGLNSFALPSAASMSPSAAATAPYSSAATRYGGF
LSSSTGGQLHYNPNSSSGSSSSASSSAAAGFPEVGTDTPPQTPPNMKVGTPNGAIQAPPG
AYCPGGAATTASSSNVTSAHYPGTGHASASSTGYLSSSSGSASSVSSFSSRLQASPHKDF
STINQSSLLHQQSTTNLPANESTTAFKPFYKGSQPMTSGFVSPV
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgtacgctcaattcggatactcctatccgtcggcctctcagttgttggtgagc
ggcggacagccgacgacggcaacgtcaccggcaatgtcctcgggtggtggattgagtccg
ggcgccctgtcgccgtcatcgacagcgacaacgacgacgacgaccggtggcgcgggaggg
accggtaccggtgcaggtacaccaggaggagcgaccggtggtggtgcgagcacccccgtt
ggtagcggaggacctcctggcaccgcttgctgtgaaaatggcaggccgatgatgaccgat
cccgttaccggtcaaaccgtgtgctcctgtcaatacgacagcgcggcgaggctcgcgctc
ggcgcttatcctcgactcgcaccaagcgccacttcgtactcgtcttatccgaccccgacc
ccatccgctaccgatcaaacgccgtatccgagtatcggtatggacagctccgccttttat
tcacctttgggtaatccgtatggactgaaggacgcgacgggaatgggaatgacggcggat
atgggcagcgcatggggcacggcggcgctccagccagcggcgactggatactacccttac
gatccaaccctcgcagcctacggatacggagccggctacgatctcgcagcgagacggaaa
aacgctacgagagaatcgaccgcgaccctcaaagcgtggctcaatgaacacaagaaaaat
ccatatccaacgaaaggcgaaaaaataatgctcgcgatcatcacgaagatgaccctcacc
caagtttcaacgtggttcgcgaacgcccgaagacgtctcaaaaaagagaacaaaatgacg
tgggaaccgaaaaataaaacggacgatgacgacgatgctgtcctcacggattccgaggat
aacaaggacaaggaggatagtgtggctgacagcagaagcgacagagtcggagatgaagca
agacgaaacatcgacgacaacgaacctatgaggcacgttaaggcggaacatcttcagcac
gacaaggatttagaagacgacgatgacctagatctcgaggacgatcaccatcgccgacca
gaactctcgtttcaccacacgatacagcagcaacaacagctgcatcatcatcatcatcat
catcaccagggttacgaggatcacctgaaagacgaagtcgtcaagtccgagtgcggtgtc
gtgggcggtgttcccataccagcgacgaagccaaaaatctggtcattggcagataccgca
gcctgcaaaactccgccacctacgcatcctcatcaccagcagtatcaggtacatcagcat
catcaacactacggtctccaacagcatcagcagcatcatcaacatcatcaactgcagcac
cagcatcaacatccccatcaacatcatcatcatcagcagcatcaacagcagcagcagcaa
caacagcagcatcagcatcatttagcggcgcagggacatcatcagtcgcagcaaccttgg
ctcggtacgagcggaggcgccggactaaattcgtttgctctgccatcggccgcttcgatg
agcccatcggccgcggcgaccgctccttattccagcgcggccacgagatacggcggcttc
ttgagctcctcgaccggtggccaacttcactataaccccaactcctcgtccggctcatcc
tcgagcgcatcttcctcagctgcggcggggtttcccgaggttgggacggatacaccgccc
cagacaccaccgaatatgaaagtcggaacgccgaacggagcgatccaagcacctccgggg
gcttattgccctggtggcgcggcaaccaccgcttccagtagcaatgttacatcggcccat
tatcccggtactggccacgcgtccgcctcctcgactggctatttatcttcgagttcgggt
tcagccagtagcgtttcttccttctcctcccgactccaggcatccccgcacaaggatttt
tcgacgatcaatcaaagctcgttgctccatcaacagagcaccactaatttgcctgccaat
gaatccacgacggcgttcaaacctttctacaaggggtcacagcctatgaccagcggtttc
gtttcaccggtctag
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