Venturia canescens: 122418052
Help
Entry
122418052 CDS
T09386
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcan03009
]
122418052
Enzymes [BR:
vcan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122418052
Ribosome biogenesis [BR:
vcan03009
]
Eukaryotic type
Pre-60S particles
Helicases
122418052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
INTS1_INTS2-bd
Motif
Other DBs
NCBI-GeneID:
122418052
NCBI-ProteinID:
XP_043287993
LinkDB
All DBs
Position
1:complement(11776451..11778774)
Genome browser
AA seq
556 aa
AA seq
DB search
MSTTLSDEEMQTEEENEEKVKSFHELEIDDRILKAIAKLGWLEPTLIQEKTIPLLLEGKD
VLIRARTGSGKTAAFAIPLIQKILLGKELQPRQETKGLILSPSKELCKQIHQVLNSLTIK
CCREVKCIDISSQVDLDTQKPLLAEKPDIIVGTPGRVLQHLKAGNMKLKHSLEMLIIDEA
DLIFSFGYEDEIKSVLNYLPTVYQAALASATLSDDVLSLKQLVLHNPAILKLEEPPLAPP
SQLAHYSLAADENDKAAILYALLKLHLIRGKSIIFVNTVDRCYKLKLFLEQFGIPTCVLN
SELPASSRCRAVMQFNSGTYDIIIASDEKALDEPHYVKQKKSKRRKDKESGVARGVDFQF
VSNVINFDFPLDVNSYVHRAGRTARGKNQGTALSFVAIRERPLLDEVENQLKQSYGRSSL
FKTYQFKLDEVEGFRYRAKDAWKAVTRIAVREARLKEIKQEVLTCEKLKSYFEDNPRDLQ
SLRQDKALHTVRLQPHLKDVPDYIVPPSLKRLVNFGRKKRKFNRESASSGSTATKSKHAA
RASNPLISLSIGKKKK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtccacaacgttgtccgatgaggaaatgcaaactgaagaagagaacgaagaaaaagtg
aagagttttcacgaactggagatcgatgatagaattctaaaggcaatagctaaactaggc
tggcttgaaccaacgttgatacaagaaaaaacaataccgttattactcgagggcaaagat
gtactgataagggcccgcacaggttctggtaaaacagcagcgtttgccattcctcttatt
caaaaaatacttctcggtaaagagctacagccccgacaagaaacaaaagggctcatccta
tcaccgagcaaagaactgtgtaaacaaatacatcaagtccttaatagcctgacaataaaa
tgttgccgggaggtaaaatgcattgacatcagctcgcaagtagatttggatacacaaaaa
cctctcttagctgagaaaccagatatcattgtgggaacacctggaagagttctgcaacac
ttaaaagcaggcaacatgaaattgaaacatagtctggaaatgctgataatcgatgaagct
gatttgattttctcatttggttatgaagatgagataaaatcggtactgaattatttacct
actgtatatcaagcagcattagcttcagcaacactgtctgatgatgttttgtctttgaaa
caattggtacttcacaatcctgctattttgaaactggaagaaccacctcttgccccaccc
tcacaattagcccattacagtttagcagctgacgaaaatgacaaagctgcaatactttat
gcgcttctcaaattacatttaataagaggaaaaagtatcatatttgtcaatactgtcgat
cgttgctacaagctcaaactatttcttgaacaattcggtattcctacatgcgttttaaat
tcagaattgccagcttcgtcgaggtgtcgagcagtgatgcaattcaacagtggtacttat
gacataatcattgcatccgatgagaaagctttggatgagccccactatgtaaaacaaaaa
aagagtaaacgtagaaaagacaaagagtctggtgtagcgcgtggggtggatttccaattt
gtctcgaatgtaataaatttcgatttcccactggatgtcaactcttacgttcaccgggct
ggtcgtactgcaagaggtaaaaatcagggaacagctctaagttttgtggctataagagaa
cggccacttctcgatgaagtcgagaatcaattaaaacagagttacggacgatcgagcctt
ttcaaaacctatcaatttaaattagacgaagttgagggttttagatatcgtgctaaagac
gcttggaaagccgtgacaagaatagctgtaagagaagcccgtcttaaggaaatcaaacaa
gaagtattgacttgtgaaaaattgaaaagttacttcgaggataatcctcgtgatttgcaa
tctctgagacaagacaaagcattgcacacagtgagattacagcctcatttgaaagatgta
ccagattacatagtcccaccttcattaaaaagactagtaaattttggtcgaaagaagaga
aagttcaatagagaatcagcgagttcaggttccaccgcaacaaaatctaaacatgctgca
agagcttcaaatcctctgatcagtctgagtattggcaaaaaaaagaaatga
DBGET
integrated database retrieval system
