Venturia canescens: 122418118
Help
Entry
122418118 CDS
T09386
Name
(RefSeq) HEAT repeat-containing protein 1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
vcan
Venturia canescens
Pathway
vcan03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122418118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcan03009
]
122418118
Ribosome biogenesis [BR:
vcan03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
122418118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT_2
HEAT_EZ
UBA_N4BP1_C
ParcG
Motif
Other DBs
NCBI-GeneID:
122418118
NCBI-ProteinID:
XP_043288104
LinkDB
All DBs
Position
11:3849304..3856610
Genome browser
AA seq
2105 aa
AA seq
DB search
MSTSLAEQLNKLRAPQTSILLQNKKRPSLLFDPKEAADLDRENVLNIGQSGLEDLSQLCD
SFGEFKGTLFSRDALNLERSVEDSIANARLNAGIEKFLILLSPYFMLNSAHKALEWLIHR
FRIHEYNRKEFMLLILPYHETRIFVRALQLFDLSANNDRWKWLEGLQKPGVPLSSLTLIN
RAATDNGLLKLLCRHVVQATMIFGDKANRLSTLYAFYTTLIVGALERTASISEIQTSHVL
SSLTKGLTSSIRGFQTSSYLILGKLCTRASIEAATLDHLILKLMKNPQSPCEAVLLILFI
YENSLNRPTRVSEKVALRVAKSRGSFVEHLSRMKLGGGLDVTIFMVPLIRTCLELVIGRT
PEESHDIRSALEEIFLGTSFDDTEIDLILECMVKPYDDIEMSEETKIFLANLFEQVEKRY
PSRFDEYVNNLMRKSENDTSCKMTLQLLMRWHSRARNAKDSLDILNRLNHPSPYQRIAGL
EIIARGEVEITETFREMVNKALIARFSDQDSRVVKTLLKLPREGLMKSLFPRDTLVDELM
ILLAQCNSQKQRGLAKLAIELLLDICEDVEDDTSIFIATMPYLFPSRDEEIDISMEILRS
KYSENNRYMKKVREDMGGGGKGANAEAISSAAFHNILKWELLPPIKNIVGTIKSQSCRGD
ATSMFFNLLLLGSVCRVPVGSLSNSIALEIIEIAAEMTKYYPKVRRLGNCNQLNADKISE
ALALTSEGILPLQACTYVIEMVHRRIDINKAANASIDFENDQERAILLLRLLEILFEGMS
LPSRRAHYSWCLKIFFQRHFSSSREILVFLSQFFTAPVNSQTSLHCLKISLDILESTRSY
NWIFEDRVFVPNLLVGLARPNDPCRLAAVEILKKISQTFNLTMPGFSSLLHELANKSADL
SIDPEQLSLLMYTLLSPDPDVIHQLERESRKNLEETRKSLIRKIIEENTCVRMSAQLLQI
LTHVNAPEILVDLSKFGLKLYKRCATDAAAAAPPDSKKFSCQALRNIFQRFNSTSVESLL
ETCVFEIFDLAMSDHRPIIPIECTESMESAGTHPTGITRRVSPSSIMIKQIDQEFYERAR
KVSPLLARKIFFKLVDVVTECEIGAVVAACNRAVRRIKIDASMVVEELRRMKNARLPESE
CTANSRSKRRSRGGGGGQPPRPEVTDTGDWKRGITILEFVQRAENIENEKILIPMLFEIL
RVSLSFEIQNPLEYVNQLVLSTIYHLTTKGYPINEAHIYIDLIAQCIRISHNPQTHHHAL
LVLVELFKTANVETALHNIMPIFTFMGSSVLRQDDAYSIQIISKTIETIVPIVTSANDAK
HACEIIRIFVVSLPHIPEHRRIPVFIKLLQLLDKHLHIFYLVTFDAHVTTGRGPLLPNKV
VVVAPSPARKNSSERLEFALRISHEFSAPRILQVSIEILKFVRSLPIDIENETERKKIHF
SQKYIFDVANNSPKQLRHYKYTVVQFLVALLTSHDFVNKVATIESATEVHEIMEPLYDRA
MVEIILLIESFGRSADLHHASTGGNVQAKYWKVLLHNIYDIFDAVNNLLPNSIFVSTVTR
LLAHDLSAVRKKALELLNLRLHQKKFNVDDHQRLLPVVDSLREIVDNSRKGKIFSPELEI
IQQTALISLKLMAKLLATDNPGHFKPVLDLTTELMKTKEGPLLASSVLCTAELCASMRTH
AIKSLNKFVPAVIRLLKVHCNKESPDFVVVSIVSALQKIVESVGNFLSLYLDQLLLELTR
LSSVYTDTENPKIGLVASKLKGTSEKLASSIPMRVLLPAVSETYDLLIASKLYRSVQPLL
NIIGESFGNVPTNELQASIPDLAKFFLKVLQFREEVEIVDTEMATSEDVSRLEESASRAL
VALVLKLSEATFRPLYYKLYDWAARFPEKKQRNITFYRLSANIAERLKSLFVLFAGHFLK
HASSLLRANNLAVTEEPCELLTLPEESRRIELIEAILLTLYRVFGYDAHNFVNQERFQVL
AQPIVDQLENTAGTRQEFEKRACELIVPCVAAFAGAIQDDSLHKQLVYQTLLKTRHTKPY
VRSAALGALVEIARKLGEDFMPLLPETVPFLAELLEDEDESTEKIAQNAVRTLEDILGEP
LQKYF
NT seq
6318 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacttcattggcggagcagttgaataaactgcgtgctccgcaaacttcaatattg
ctacaaaacaaaaagcggccaagtttgttatttgatccaaaagaagcggctgatcttgac
agagagaacgtcttgaacattggtcagagcggcctggaagatttgagccagctatgcgat
tcgtttggggaattcaaaggcacattattctcaagggatgccttgaatttggagcgttcg
gtagaggattcaatagcaaacgcgcgtttgaacgccgggatagagaaatttcttatcctc
ttgtcgccatattttatgttgaacagcgcgcacaaagctctggaatggttgatccatcgt
tttcgcattcacgagtacaacagaaaagaatttatgttgctgatactgccgtaccatgag
acaagaatattcgtcagggcgttgcagctctttgatctttcggcgaacaacgacaggtgg
aaatggttagaaggtttgcaaaaaccaggagttcctctgtcttcgttgacgctgattaac
cgagcggcgacggacaatggattgttgaaattgttgtgcagacacgtggtacaagccacc
atgatttttggagataaggcaaatcgtttgagcacgctttacgctttttatacgacgttg
atagtcggagctttggaaagaacagcgtctataagcgagatacaaacgagtcacgttctc
tcgtctttgacgaaaggtctgacgagttcgatacgcggttttcaaacgagcagttacttg
atccttggaaaattatgtaccagagcgagtatcgaggctgcaacattggatcatcttatt
ttgaaattgatgaaaaatcctcagtcgccctgcgaagcggttctattgattctttttatt
tatgaaaactctttgaaccgtccaactcgggtatctgaaaaagtagcattgagagttgca
aaatcgcgtggatcgttcgtggagcacttatcgagaatgaagcttggcggaggtttggac
gtgacgatattcatggtgccgcttatacggacttgcctcgagctcgttattggccgaacg
cccgaggaaagccatgatataagaagcgcgctcgaagaaatatttcttgggacgagtttc
gacgataccgagatcgatcttatattggaatgtatggtaaaaccatacgatgatattgaa
atgagcgaggaaactaaaatatttttggctaatctgttcgagcaggtggaaaagcgttat
ccatcgagattcgacgaatatgtgaataatcttatgagaaagagcgagaacgatacgagt
tgtaagatgacgttgcagctgttgatgcgctggcattcgagagcccgcaacgctaaggat
tcgttggacatactgaatcggcttaatcatccgtctccttatcagagaatcgctggattg
gaaataatagctcgcggtgaagtagagattaccgaaacattccgagagatggtgaacaag
gcactgattgcgagattcagcgaccaagattcgagagtggtcaagactcttttgaaattg
ccacgagaaggcttgatgaagtcgctctttccgcgcgacactcttgtcgacgagctcatg
attttgctcgctcaatgcaacagccaaaaacaaaggggtctcgctaaattggcaatcgaa
ttattgttggatatatgcgaggacgtcgaggatgacacgtcaatctttatcgcaacgatg
ccatatttgttcccgagtcgggatgaagaaattgatatatcgatggaaatattgagatcc
aagtattcggaaaataatcgttacatgaaaaaggttcgcgaggatatgggaggaggagga
aagggagcgaatgccgaggcaataagctccgccgcgtttcacaatattcttaaatgggaa
cttttgccaccgattaaaaatatcgttggaacgataaaatcacaatcttgtcggggtgac
gcgacatccatgttcttcaatctgttactcctcggttctgtatgtcgagtacccgtcggt
tccttgtccaattcaatcgccctcgagattatagaaatagccgccgaaatgaccaagtat
tatccgaaagtccgtcgacttggcaactgtaatcaattgaacgccgacaaaataagcgag
gctttggctctgacatccgaaggtattctccctcttcaagcgtgcacatacgttatcgag
atggtgcatcgtcggatagacattaataaggcggcaaatgcttcaatcgattttgaaaat
gaccaagagagagcgatattattgttacgacttttggagatacttttcgaaggtatgagc
ctaccctcccgaagagctcattattcttggtgtttgaagattttttttcagcgtcatttc
tcaagctcccgagaaatactcgtatttctatcgcaattcttcaccgcacccgttaattct
caaacctcgctgcactgtttgaaaatcagcctcgacattctcgaatcaacgagaagttac
aattggatattcgaggatcgagttttcgtaccgaatctcttggtcggactggcgcgtccc
aacgatccttgccgtttggccgccgtcgagatattgaaaaaaatttcacaaacgttcaat
ctgacgatgccgggcttttcgagcctccttcacgagctcgccaacaaaagcgccgatctc
tcgatcgatccggaacaattgtccctccttatgtacacgcttttatcccccgatcccgac
gtgattcatcaactcgagcgagaaagtagaaaaaatctggaggaaacgagaaaatcactg
atccgtaagattatcgaagaaaacacttgtgtacgtatgagtgcccaattgttgcaaatt
cttacgcacgtaaacgctccggaaatactcgtcgacttgtccaaattcggtttgaagctt
tacaaacgatgcgcaacggatgctgctgctgctgctcctccggactcgaagaaattcagt
tgtcaagcattgagaaatatttttcaacgattcaattctacgagcgtcgagtcgcttttg
gaaacttgtgttttcgagatttttgatctcgcaatgtccgaccatcgtccaattattcct
atcgaatgtacggaatctatggaatcggcgggcacacaccccaccggtatcactcgacgg
gtatcaccgagctcgataatgatcaaacagatcgaccaagagttttacgagagagctcgt
aaagtatcacccttgcttgcgagaaaaatattctttaaactcgtagacgttgtaaccgag
tgtgaaatcggagcggttgtcgcggcatgcaacagggcagtcagaaggatcaaaatcgat
gcgagtatggtagtcgaagagttgagaagaatgaagaatgctcgactaccggaatccgag
tgtacagcaaattcgagaagcaagagaagatcgcgaggaggcggcgggggacaacccccg
cgtcccgaggtaaccgatacgggggattggaaacggggtataacgatattggaattcgtt
cagagagccgaaaacatagagaacgagaaaattttgataccgatgcttttcgaaatattg
cgagtttcattgagcttcgagattcaaaaccccctcgagtatgtaaaccaattggttctt
tcgacgatttatcatttgactacgaaaggttacccgatcaacgaagcgcatatttacatc
gatctcatagctcagtgcataagaatttctcacaatccgcaaactcatcatcacgccctt
ttggtcctcgtcgaattattcaaaactgccaatgtcgaaactgctcttcacaacattatg
ccaatttttacgttcatgggaagttcggtgttacgccaggacgacgcttattccatacaa
ataatatcgaaaacgatcgagacgatcgtgccaatcgtcacttcggccaatgatgcgaaa
cacgcttgcgaaataattcgtatattcgtcgtatcgttgcctcacattcccgaacacagg
agaattccagttttcatcaaattactacagcttctcgataaacatttgcatattttttat
ctcgttactttcgacgctcacgtaacgacggggagagggccgctgctgccgaacaaagtc
gtcgtcgtcgccccctcgccggctcgtaaaaattcctccgaacgtttggaatttgccttg
agaatttcacacgaattttcggcccctcgaattttacaagtttccattgagatattaaaa
ttcgtcaggtccctgccgatcgacattgagaacgaaaccgaacggaagaaaattcatttt
tctcaaaagtacattttcgacgttgccaataactcgccgaagcaattgaggcactacaaa
tacacggtcgtacaatttttagtcgccctcttgacgagccacgatttcgtcaacaaagtt
gccactatcgaatcggcgacggaggttcacgaaataatggagcctctttacgatcgagcg
atggttgaaattattttgctaatcgagagtttcggcagaagcgccgatctccatcatgca
tcaaccggcggcaacgttcaagccaaatattggaaagttctcctccacaatatttacgat
atcttcgatgccgttaacaatcttcttccgaattccatattcgtttctaccgtgacgcga
ttactcgctcatgatttatcggccgtcaggaagaaagctctcgaattgttgaatttacga
ttgcatcagaagaaattcaacgtcgatgatcatcaacgacttttacccgttgttgattct
ctaagagaaatagtcgataatagtaggaagggcaaaattttcagcccggaactcgaaata
attcaacagaccgctctcatcagcctgaaacttatggccaagttactcgcgaccgataat
cccgggcatttcaaacctgtgttggatctgacgacggaattgatgaaaactaaggaaggt
ccgttattagcgagctcggtactctgtaccgctgagttgtgcgcttcgatgagaacccat
gcgattaaatccctcaacaaattcgttcctgctgtaatacgcctcttaaaggtccattgt
aataaagaatcaccggatttcgtggtcgtcagtatcgtcagcgctctacaaaaaatagtt
gaatcggttggaaattttttgtcattgtatttggatcaattgctcctcgaattgaccaga
ctcagttccgtctataccgataccgaaaatcccaagattggtctcgtagcctcaaaatta
aagggaacgagtgaaaaattggcaagttcgataccaatgagggtcttattgccggcggtc
tcggagacttacgatctgttgatcgcatcgaaattgtatcgatctgtacagcctttgttg
aacattattggagaatcttttgggaacgtaccgacgaacgagcttcaagcttcgattccg
gatctagcgaaatttttcctcaaagtattgcaattccgcgaggaggtagaaatcgtcgat
acggaaatggcgacgagcgaggatgtttctaggctcgaggaaagcgccagtcgcgccttg
gtagctttggttctcaagctcagcgaagctaccttcagacctctttattacaagctctac
gactgggccgcgagattcccggagaagaaacagagaaatattacgttttatagattgtcg
gcgaatatcgcggagcgtctcaagtcactcttcgtactgtttgccggacactttttgaag
cacgcctcatcattgttaagagcaaataatttagcggtgaccgaggaaccctgcgagttg
cttacattaccggaagagtcacgaaggatcgagcttatcgaagcgattcttctcacgctg
tatagagtctttggttatgatgcgcacaatttcgtaaatcaggaacgattccaagtcctg
gcgcagccgatcgtcgatcagctcgaaaatacggcggggacccgacaagaatttgagaaa
cgcgcgtgcgagcttattgttccttgcgtcgcagcttttgccggtgcgattcaggatgat
tctctgcacaaacagctcgtttatcagactcttctcaaaactcgacacaccaagccctat
gtacgaagtgccgctctcggtgctcttgtcgagatagcgagaaaacttggcgaagatttc
atgcctcttctgccggaaacggtaccatttttggccgaattattggaggacgaggacgag
agcacggaaaagattgcacaaaatgcggttcgaacgctcgaggatattctcggagagccg
ttacaaaaatatttttaa
DBGET
integrated database retrieval system
