Venturia canescens: 122418376
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Entry
122418376 CDS
T09386
Name
(RefSeq) serine-arginine protein 55-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
vcan
Venturia canescens
Pathway
vcan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122418376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcan03041
]
122418376
Spliceosome [BR:
vcan03041
]
Common components
Common spliceosomal components
SR proteins
122418376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_7
SET_assoc
Motif
Other DBs
NCBI-GeneID:
122418376
NCBI-ProteinID:
XP_043288466
LinkDB
All DBs
Position
11:8975652..8991648
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AA seq
372 aa
AA seq
DB search
MDGKKGMVGTRVYVGGLPYGTRERDLERFFKNFGRCRDVLIKNGYGFVEFDDYRDADDAV
YELNGKELLGERITVERARGTPRGSDQWRYGDSRGGFGGDSRRPARDDMRHDRDSVNRNT
RTASSYKQSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEG
VVEFATYSDLKNAIDKLDDTELNGRRIRLVEDKRRGRRSRSSSSRSRSRSRSRSRRRSRS
RSRSRRSSRSRSRRSSRSKSRAPTISKSKSKSKSPERGRSRSKSKSRDRSKSKSKSRSRS
RSKAERSKSRSQSKSKAKSPSNSGYSRDRSSRERSRGDRSRSRSNSKHSKSRSRSRSPMN
GDKSPDMKMKDD
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggatggaaaaaaaggtatggtagggacaagggtctatgtcggtgggcttccatacggc
accagggaaagagaccttgagagatttttcaaaaacttcggtcgttgtcgtgatgtcctc
atcaagaatggctatggctttgttgaatttgacgactacagggacgctgatgacgcggtt
tacgagctcaatgggaaggaacttttgggcgagagaattactgtagagagggcccggggg
acacctaggggtagtgaccagtggcgctatggtgactcccgtggtggttttggtggtgac
tcgaggcgacctgctcgggacgatatgcgacacgacagagatagtgtgaacagaaacacg
aggactgcatctagctacaagcaatcattgcccagatacggaccaccgactcgcaccgag
tatcgtctcacagtggaaaatctctcgagccgcgtcagctggcaggatttgaaggattac
atgagacaagccggcgaagtaacttacgcagacgcacataaacaacgtagaaacgaaggg
gttgtggaatttgccacttactccgatctgaagaacgcaattgacaaattggatgacacc
gagttgaacggtcgtcgaattcgcttggtcgaggacaagagacgaggacgtcgttcccgt
tcctcaagctcgagatctcgttcaaggtccagatctcgatcccgtcgtcgttctcgttct
cgttcaaggagccggcgcagctctcgtagccgtagtcgtcgcagcagccgttcgaagtca
agggcacccacgatatccaaatcaaagtccaaatccaagtctcctgagcgtggtcgctct
cgttccaagtccaaatccagggaccgctctaagtcaaagtccaaatccagatcccgctcc
aggtccaaggctgagagatccaaatcaagatcgcagtcaaagtccaaagccaagtctcca
tcgaacagtgggtattccagggacaggtcgagccgcgagcgctcgcggggcgacagatcg
agatctcgttcaaacagcaaacacagcaagagtcgcagtcgctcccgttccccgatgaac
ggagacaaatcaccggacatgaaaatgaaggacgactga
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