Venturia canescens: 122418538
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Entry
122418538 CDS
T09386
Name
(RefSeq) PMS1 protein homolog 1-like isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcan03400
]
122418538
DNA repair and recombination proteins [BR:
vcan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
122418538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HMG_box
HATPase_c
HMG_box_2
HMG_WDHD1
DGKD_4H
CHDNT
Motif
Other DBs
NCBI-GeneID:
122418538
NCBI-ProteinID:
XP_043288745
LinkDB
All DBs
Position
11:complement(9218150..9222257)
Genome browser
AA seq
732 aa
AA seq
DB search
MSIKPLSQNTVKFLTTTQVITSVVTAVKELVENSIDAQAKRIEINLNDNGATLIEVSDDG
KGISREDTPFMALQSYTSKIGDFNDLDSLESYGFRGEALNSLCKVSDVTLITKTKEDDVA
RSYKLNHNGDIENCELCYHSIGTTVRAKYLFKDLPVRRQLLTASKNSSQEVKNLLLPYAI
CQPQMRINLRANGSVLLTKPSTASPKETLSALFGNKFASQVDFVEKNIYETTIHLSIPRK
DATELSELCQAGQYTCVNKRPVIYKEFEKTINKRLVEYFGEKIPSKKKLAFVLDLQVLTS
NVDVNLEPNKTKIFLTNQSKISEALDQVLTEYYELEPKMQDIARDKIALVDESTEYFDCT
STEMSLSAENFNSPACKKRKIDKENKKTPGKPNRRVEASHLNKENRSSNAAQKIDDSLEE
MTETISQLPVVDLGEDFTVEEISGLPNLKAEQVSTVLNDVEVHNGNSNSNETKGNGNFTL
EAWSKGQVPTNLRGGTDVQPYGNVVKNVMQGESKGTREEPDPSSTGCKGFLKFSKEMRRQ
IIEENPGINFVEVATTLTKRWKELSPEERGYYRDLAASENQSSSQLMKYDRTTGPIKSQK
LAKKATDLPDKNNKQRLIAMLENMKRGTKKDNLMRKTIVPCTIDMENVRNQFFDSRRKVA
AKNLVVGALSENLWIARTGCQLWALSLEQLHRGLQIERNSIEETRDSVEQLVKRLLEEKD
GISLLHPVFDLR
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcaagcctctcagtcaaaatactgttaaatttttaaccacaactcaagtaatc
acgtctgtcgtcactgcggtcaaagaactcgttgaaaattcaatcgatgcacaggctaag
cgcatcgaaattaacctcaatgacaacggagctacgcttatagaggttagcgacgatgga
aaaggaatatcaagagaggacacgccgttcatggctttgcagtcgtatacttcgaaaatt
ggggacttcaatgatttggattccttagagtcgtatggcttcagaggcgaagcactgaat
tctttgtgcaaagtatctgatgtgactttgattacaaaaactaaggaagatgacgttgcc
agatcttataagctgaatcacaacggggatatagagaattgcgagctttgttatcattcc
atcgggacaaccgtgagggctaaatatttgttcaaagatttgccagtccggaggcagctg
ttgacggcgtcgaaaaattccagccaagaagtgaaaaatctcttgctcccctacgcaatt
tgtcaaccacaaatgcgaattaatttgagagcaaacggcagtgttctcctgacaaaacca
tcaaccgcaagtcccaaagaaacactttcagcacttttcggaaataaattcgcatcgcag
gtcgattttgttgaaaagaacatatacgaaaccacaattcatttgtctattccacgaaag
gatgctacggaattgagcgaactttgtcaggccggacagtacacatgcgtcaataaacgt
cctgttatttataaggaatttgaaaagaccatcaacaaacgtttggtcgaatattttgga
gagaaaataccttctaaaaaaaaactggccttcgtgttggatcttcaagttttaacgtcc
aatgtcgacgtcaatttggagccgaataaaacgaagatatttcttaccaaccagtcgaaa
ataagcgaagctctggatcaagtgctcacagaatattacgagttggagccgaaaatgcag
gacattgcgcgcgataaaatcgcgctcgtcgacgaaagtacggaatactttgactgcacg
agcaccgagatgagtctttctgcagaaaatttcaattcgccggcctgtaagaaaagaaaa
attgacaaggagaataaaaaaacgccaggaaaaccgaatcgcagggttgaagcgagccat
ttgaacaaagaaaatcgcagctccaatgcagcacaaaaaattgatgactcgctcgaagaa
atgacggaaacaataagccagttgcccgtcgttgacttgggagaagattttaccgtggag
gaaatttcgggattgcctaatttaaaggctgagcaagtttcgaccgtgttaaacgacgtc
gaggtgcataatggcaattcgaacagcaacgagacgaaaggcaacgggaatttcacgttg
gaagcatggagcaaaggccaggtgccaactaatttacgaggcggcacagacgttcaacca
tacggaaatgtcgtgaaaaacgtgatgcagggggaatcgaaggggacgagggaagaaccg
gacccgagttcaaccggctgtaaaggattcctgaagttttcgaaggaaatgagacgtcaa
ataatcgaagaaaatccgggaataaatttcgtcgaggtcgctacaaccttgacgaaacgt
tggaaagaattgtctccggaggagcgtggatattatcgagatttggcagcgagtgagaat
cagtcgagctctcaattgatgaaatacgacaggaccaccgggccaataaagtctcaaaaa
ctggcgaaaaaagcgactgatttgccagacaaaaataataaacaacgactgatcgcgatg
ctcgaaaatatgaaacgtggaacaaagaaagacaatttgatgagaaaaactatcgtccct
tgtaccatcgatatggagaatgtgagaaaccaattcttcgattctcgacgcaaagtcgcc
gcaaaaaatctcgttgtcggagctttgagcgaaaatttgtggatagctcgaacaggatgc
cagctttgggctctcagcctcgagcaacttcatcgtggacttcagatcgaacgaaactcc
atcgaggaaacgagagattctgttgaacaactcgtgaaaagattgctcgaagaaaaagat
ggaatttcattgcttcaccctgtcttcgacctccgatag
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