Venturia canescens: 122419257
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Entry
122419257 CDS
T09386
Name
(RefSeq) protein suppressor of forked isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
vcan
Venturia canescens
Pathway
vcan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122419257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcan03019
]
122419257
Messenger RNA biogenesis [BR:
vcan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
122419257
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
122419257
NCBI-ProteinID:
XP_043289607
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All DBs
Position
1:17874281..17883791
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AA seq
721 aa
AA seq
DB search
MTDEKTDFDWGNEKLQRAQKTVNESPYDLEAWSILIREAQNRPIPEVRPMFEKLITAFPS
AGRYWKIYIEQEMKMRNFEKVEKLFQRCLMKILNIELWKLYLSYVKETKASLATYKEKMA
QAYDFALDKIGMDIHSYSIWNDYVTFLKSVEAVGSYAENQKISAVRKVYQRGVINPMINM
EQLWKDYMTFEQNINPIIAEKMAIERSRDYMNARRVAKELEAVTRGLNRSAPSVPPTGHA
EEIKQVELWKKYIAWERSNPLRTEDTSLVARRVMFAIEQCLLCLGHHPAVWHQAAHFLEL
SSKILTEKGDVNAAKNLSDEAGTMFERATNTLLSKNMLLYFAHADFEEGRVKYEKVHQIY
QKFLDIPDIDPTLAYVQYMKFARRAEGIKSARTVFKRAREDQRCRHHVYVAAALMEYYCT
KDKNIAFRIFELGLKKFADNPEYILCYIDYLSHLNEDNNTRVLFERVLSSGSLEPEKSVD
IWNRFLEFESNIGDLASIVKVEKRRSAVLEKLKEFEGKETAQLVDRYKFLDLYPCTTMEL
RSIGYVEVSGGTRNPIGNMPRVPEVSETRTVLPRPDLSQMIPYKPKVNALPGEHPVPGGS
FPLPPTAAQLCTLLPPPGCFRGPFVAVDLLMDVFSRIQLPEHGRIYRQNNSPMPVADNGC
DTKLFDLAKSVHWIVDETNDGPSIGSKRRRGRLGGEDSEDEDLPPPPANDIYRQRQQKRV
K
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgagaagactgatttcgattggggtaatgagaagctgcagcgggctcaaaaa
actgtcaacgagtcaccatacgaccttgaagcatggagtatacttatcagggaagcacaa
aacagacccatacccgaagtacgcccgatgtttgaaaaactcatcactgcttttccatct
gccggccgctactggaaaatttacattgaacaagagatgaaaatgcgcaactttgagaag
gtcgaaaagcttttccaaaggtgcctcatgaaaatcttgaatattgaattgtggaaactg
tacctttcttacgtcaaagaaactaaggccagtcttgcaacgtacaaagaaaaaatggcg
caggcttacgattttgcgttggacaaaattggtatggacatacattcgtacagtatttgg
aacgactacgtgacgtttctcaagagtgtcgaggccgtgggttcttatgctgaaaatcaa
aaaataagcgccgtacgaaaggtttatcaacgaggcgtcattaatccgatgataaacatg
gaacagctgtggaaggattacatgactttcgaacaaaatatcaatccgataatagcagaa
aaaatggctatagagagatcgagagattacatgaacgcgagaagagttgccaaggaactg
gaagctgttacgagaggactcaatagaagtgcacctagcgtaccacctacgggacatgcg
gaagaaatcaaacaggtggaattgtggaaaaaatatatagcttgggagagaagtaatcct
ttgcgaaccgaagacacgtctttggtagcacgacgagtaatgtttgcaatcgagcaatgt
ttactttgccttggtcaccatccagcagtttggcatcaggctgcacattttctcgagttg
agttcgaaaattttgacggaaaaaggagacgttaacgcggcgaaaaatttgagcgacgag
gcgggtacgatgttcgaaagagcgactaacacattgctatcaaaaaatatgttactctat
tttgcacacgccgatttcgaggaaggacgtgtcaagtacgagaaagttcatcaaatatat
caaaaatttcttgatatccctgacatcgatccgacgctggcatatgttcagtatatgaaa
tttgcaagacgcgcagagggaataaaatcagcgaggaccgttttcaaaagagctcgtgaa
gatcaacgttgtcgtcatcacgtttatgtcgcagctgcgttgatggagtactactgtacg
aaagacaaaaacattgcttttcgtatcttcgaattgggcttgaaaaaattcgcggacaac
cccgaatatattttgtgttacattgattatttatcacatttgaatgaggacaacaacaca
agagtattattcgagcgtgttctatcatcgggaagcttggaaccggaaaaatctgttgac
atttggaatcgatttttggagtttgaatcgaacatcggtgacctcgcaagtatcgtcaag
gttgagaaacgacggagtgcagttttggaaaagttgaaggagttcgaaggaaaagaaact
gcgcaattggtcgacagatacaaattcttagatctttatccctgtacgacgatggaatta
aggtctattggttatgtcgaagtatctggtggcacgagaaatcccatcggcaatatgccc
cgagtacccgaagtttcggaaaccaggaccgttttacctaggccagatctttctcaaatg
attccttacaaaccaaaggtcaatgctttgcccggtgaacatccggtcccaggtggttca
tttcctttaccaccaacagctgcacaattgtgcactttactgcccccaccaggatgcttc
agaggtcctttcgttgcagtcgatttgcttatggacgttttcagcagaattcaattgcca
gagcatggtaggatttatcgacaaaataattcgccaatgccagtcgcagacaacggttgt
gacacaaaattgttcgatctcgcgaaatcggtgcattggatagtggacgaaacgaatgac
ggtccgagcattggctcgaaacgtcgtagaggtcgtctcggtggtgaagacagtgaagac
gaagaccttccgccacctcctgcgaacgacatttatcgtcaaaggcaacaaaaacgtgtc
aagtga
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