Venturia canescens: 122419297
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Entry
122419297 CDS
T09386
Name
(RefSeq) protein strawberry notch-like isoform X1
KO
K26273
protein strawberry notch
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcan03036
]
122419297
Chromosome and associated proteins [BR:
vcan03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122419297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
122419297
NCBI-ProteinID:
XP_043289666
LinkDB
All DBs
Position
1:31748743..31760789
Genome browser
AA seq
1379 aa
AA seq
DB search
MPRPKRTATKKYKDMSDESSGSDFDDDEDPDKTEVPGGGKDLATAAGIASIKDEKPPTVA
PAAPLVKGQGGVSVLNQKFAGKIPGGLVTKTPTPGYEMVRVGGSQGVAPGFATQNQMNQL
GQFGGAMPYGFPQSLASLTGFNPAAFLQQTMEMGNIMGGFMGMAGMNMGINPFVQLLNQS
GLPPNWAAGLSGKNLSQLWMNAGDPGKMNMQPTLPEEEDGEDEEMGVAETYADYMPTKLK
LGRKHPDPVVETASLSSVEPTDVWYKLSIPDETIRSGALSALQLESITYASQQHEHLLPD
GTRAGFLIGDGAGVGKGRTIAGIIYENYLKGRKRAIWVSVSNDLKYDAERDLKDIGATKV
DVHPLNKFKYAKISSAVNGNVKKGVIFSTYSALIGESSQSGGKYKSRLKQLMQWCGDDFD
GLIVFDECHRAKNLCPTGSSKPTKTGLTVLELQNKLPKARVVYASATGASEPRNMAYMVR
LGMWGEGTPFPEFTDFIAAVEKRGVGAMEIVAMDMKLRGMYIARQLSFHGVAFKIEEVPL
SKEFAKVYDHSVRLWVDAMQRFQEAAELIDAENRMKKTMWGQFWSSHQRFFKYLCIAAKV
KHAVTVAREAVKCGKCVVIGLQSTGEARTLEQLERDDGELSDFVSTAKGVLQTLVEKHFP
APDRNRIHRLLGLEPPKPADACLDDCTIVASGSKRKPVRQAAQRASKKVRTWSSEEEISE
EDKNGGHHSSGSEFKLSGSDTEEDRRTDEESNASSDFNPFYSDSDSDADPWDRRKKKGGK
KQKKPAKKRLSTQDKIQSMLAHKTSASRNSKRNGDANMGQLGNQGINMGGRNQPSVAPPP
RDAIERACCMKEELLAQIEALGERLPPNTLDQLIDELGGPENVAEMTGRKGRVVQNEDGG
IQYESRSEVDVPLETLNLTEKQRFMDGEKTVAIISEAASSGISLQSDRRARNQMRRVHIT
LELPWSADRAIQQFGRTHRSNQVNAPEYIFLISDLAGERRFASIVAKRLESLGALTHGDR
RATETRDLSQFNIDNKYGRSALEATMKTIMGYEAPLVPPPQDYNGDFFKDVADALVGVGL
ICNSENMPGVLTLDKDYNNMSKFLNRILGMPVDLQNRLFKYFTDTLNAIITQAKKTGRFD
MGILDLGTSGENVRRVKIYRFTRKHATGTAPTELHVVHVERGMSWTEAMERFAEITGAKE
GFYLSHQVRNGKQTAILAVAVEGGKKKSEGKKDQLYMVYRPNTGLQMRQEALGELEKKYK
KVSSEEAESHWTQQYDASVDTCSHAYWRGNCKNVTLGMDCEVGLRRRSYNVLAGSVLSVW
SRVESVLTARSGHNSKMQVIRLRTDDGLKIVGTLIPKSCMETLREALSTDAEKTEEQTF
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atgccccggcctaagcgcacagcgacaaaaaagtacaaagatatgagcgacgaaagcagc
ggtagcgacttcgacgacgatgaagatcccgacaagactgaggtccccggtggaggtaag
gatcttgcaactgcagcaggaattgccagtattaaagatgagaaaccacccacggttgcg
ccagcagcaccgttggtcaaaggacaaggaggtgttagcgtactgaaccagaaatttgct
ggtaaaataccgggtggtctagtgacaaagacaccaacgcctggttacgaaatggtaaga
gtgggtggttctcaaggagtagctccaggttttgcgacacaaaatcaaatgaatcaactt
ggtcaatttggtggtgccatgccttacggcttcccgcagagtttagcttcactgacaggt
ttcaatcctgctgcttttcttcaacaaactatggaaatgggaaacataatgggaggattc
atgggtatggctggtatgaacatgggcatcaatccgtttgtacagttactaaaccaaagt
ggtcttcccccaaactgggctgctggactttccggaaaaaatttgtcacaactctggatg
aatgctggcgatcctggcaaaatgaatatgcagccaacattgcccgaagaagaggatggc
gaggacgaagaaatgggagttgctgaaacttatgccgattatatgcctactaaacttaaa
cttggacgcaagcatcccgatcctgtagttgaaactgcctcgttgtcgagcgtcgaaccc
accgacgtctggtacaaactctcaattcccgacgaaacgatacgttccggagccctttca
gctctgcagctcgaatccataacttacgcctcgcagcaacacgaacatttattgcctgat
ggcaccagagctggttttctgatcggtgacggtgccggtgtcggcaaaggccgtacaata
gccggtattatttatgaaaattatctcaagggccgtaaacgtgcaatctgggtttccgtt
tctaacgatcttaaatacgacgccgaaagagatttgaaggatattggagctacaaaagtt
gacgttcatccattgaataaattcaaatacgcaaaaatatcgtcagcggtcaatggtaat
gtgaaaaaaggcgttatattcagtacgtattcagcgttaataggagaatcatcgcaaagc
ggtggaaagtacaaaagtcgattgaagcaacttatgcaatggtgtggagacgacttcgat
ggcctaatcgtctttgacgagtgtcatcgagccaaaaatctctgtccaacgggcagctcg
aagccaacaaagacaggtctgacagtactggaacttcagaacaaattgccgaaagctcgt
gttgtttatgcgagtgcaaccggagcttcagaaccaagaaacatggcttatatggtacgc
cttggaatgtggggagaaggaacgccatttcccgagtttacagatttcatcgcagccgtt
gagaaacgaggggtcggggctatggaaattgtcgctatggatatgaaactccgcggaatg
tacattgctcgtcagttaagctttcacggtgtcgccttcaaaattgaggaagttccttta
tccaaagaatttgccaaggtttacgatcattcggttcgattgtgggtcgatgcaatgcaa
aggtttcaagaagccgccgaactcatagacgccgaaaatcgaatgaaaaaaaccatgtgg
ggtcaattttggtcatctcatcagcgttttttcaagtatctttgtatcgccgctaaggtc
aagcatgctgtcacagtagctcgtgaagctgtcaagtgtggtaaatgcgtggttataggt
ttacaatcgaccggtgaagccagaacgctcgaacaactcgaacgtgacgatggtgaactc
agtgatttcgtatcaaccgccaaaggcgtgctgcaaaccttagtagaaaaacatttcccg
gctccagacagaaatcggatccatcgacttctcgggctagagccacctaaaccagcggac
gcgtgtctcgatgattgcacgattgtcgcgagtggtagcaaaaggaaacccgtcaggcaa
gcggctcaacgtgcttcgaaaaaagttcgcacctggtcctcggaggaagaaatttctgaa
gaggacaaaaatggtggtcatcacagttcaggttcagagttcaaattgagcggcagtgac
accgaagaggatcgtcgaaccgacgaggaaagcaacgctagttctgattttaaccctttc
tacagtgacagcgattctgatgctgatccctgggacagacggaaaaagaaaggtggtaag
aagcaaaagaaaccagcgaaaaagaggctaagcacgcaggacaaaattcagtctatgctc
gcgcacaaaacttcggcgagtcgtaattcaaaacgaaacggagatgcaaatatgggtcaa
cttggtaatcagggtataaatatgggtggacgtaatcagccgagtgtggcaccaccaccg
agagacgcgatcgaacgtgcttgttgtatgaaggaagaattattggcacagatcgaagca
cttggtgaaagattaccaccaaatactcttgatcaacttattgacgaactcggtggaccc
gagaacgttgctgaaatgacgggcagaaaaggtcgtgtcgttcaaaatgaagacggaggc
attcagtacgaatcgcgatctgaggtcgatgttccattagagacgttgaatcttactgag
aagcagcgattcatggatggtgaaaaaacagtcgccataatttccgaggctgcgagcagc
ggcatatcgttgcagagtgacagacgagcaagaaatcagatgcgtcgtgtgcacataaca
ttggaattaccatggagcgcggatcgggcgatacagcaattcggtcgcacgcatcgttcg
aatcaagtaaacgctccggaatacatatttttaatatcagatttggccggtgagagacgt
ttcgcgtcgatcgttgcaaaacgtttggagagtttaggagcgttgacccatggagatcga
cgagcgacagaaacgcgagatctttcgcaatttaacatcgataacaaatacggtcgttcc
gcgttagaggcaacaatgaaaacaatcatgggttacgaggctccgcttgtaccacctccg
caagattacaacggtgactttttcaaagacgtagctgatgcccttgtcggagttggctta
atttgcaacagtgaaaatatgcccggcgttctaacgctcgacaaagactacaacaacatg
tcgaaattcctgaatcgtattctcggcatgcccgtcgatcttcaaaatcgtctattcaaa
tatttcaccgacactctcaacgctatcatcacacaagctaaaaaaactggacgcttcgat
atgggtattctcgatcttggcacttctggtgaaaatgtacgtcgcgttaaaatttatcgc
ttcacgaggaaacatgccactggcaccgctcccaccgaacttcacgttgttcacgttgaa
cgaggcatgagctggaccgaagccatggaacgttttgctgaaatcaccggtgccaaagaa
ggcttctatctcagccatcaagttcgtaatggcaaacaaaccgctattcttgccgtggcc
gttgaaggcggcaagaaaaaaagtgaaggcaaaaaggatcaattatacatggtttatagg
ccgaatactggcttacaaatgcgtcaagaggcgcttggagaactggagaaaaagtacaag
aaagtctcttcggaagaggcagagtcccattggactcaacaatacgacgcttcagttgac
acttgttcccacgcttattggcgtggtaattgtaaaaatgtgaccctcggcatggactgc
gaggtcggattacgtcgacgttcctacaacgttctcgctggttcggttctcagtgtgtgg
agtcgggttgagagtgtactcaccgcaagatccggccataattccaagatgcaagtcata
cgcttgcgaacagacgatggtttgaagatcgttggaacactgattcccaagtcttgtatg
gaaacgttgcgcgaagctctttctaccgatgcggagaaaaccgaagagcagacattttga
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