Venturia canescens: 122419412
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Entry
122419412 CDS
T09386
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
vcan
Venturia canescens
Pathway
vcan03030
DNA replication
vcan03420
Nucleotide excision repair
vcan03430
Mismatch repair
vcan03440
Homologous recombination
vcan03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122419412
03420 Nucleotide excision repair
122419412
03430 Mismatch repair
122419412
03440 Homologous recombination
122419412
03460 Fanconi anemia pathway
122419412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcan03000
]
122419412
03032 DNA replication proteins [BR:
vcan03032
]
122419412
03400 DNA repair and recombination proteins [BR:
vcan03400
]
122419412
Transcription factors [BR:
vcan03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122419412
DNA replication proteins [BR:
vcan03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
122419412
DNA repair and recombination proteins [BR:
vcan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
122419412
MMR (mismatch excision repair)
122419412
DSBR (double strand breaks repair)
HR (homologous recombination)
122419412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
C1_2
Motif
Other DBs
NCBI-GeneID:
122419412
NCBI-ProteinID:
XP_043289883
LinkDB
All DBs
Position
1:complement(7410455..7414961)
Genome browser
AA seq
603 aa
AA seq
DB search
MIDLSEGALDAIMAGETVEGPIVQILGHKKLASSTSGERYRLLLSDGKRINSLTMLATQL
NHMIDTELTEFAICKINRYAMSNVNNAGKPKRVMVILNIEVKTPGSEVGGKIGNPTQLDA
QPETEQASAAPQSKPQAPPPSPKTSAAAGFQRKRLDESVSAGSDITTTPIAALSPYQNRW
VIKARVTNKPGIKTWSNSRGEGTLFSMDLVDESGEIRCTAFREQCDKFYNMIEIGKVYYI
SRCALKPANKQFSTLKNQYEMTMTNDTEVVACHDEVDDIPAISFDFQPLSEVETKEKNTV
MDVLGIVKSYDDVQTLVARNTGRELRKRDVQLVDMSNVAVTLTLWGSQADDFSPVDNPVL
AVKGARIGEFNGGKNLSTLQSSTLQLDPDLPEAHRLRGWYNTTGKEQECKFISKAGGGSL
NAPLTTAFEAMNKCQQLTDGQETFMIKGCISLIRTENALYKSCPTEACKKKLVDQANGMY
RCEKCDREFPNFKYRLLINLNVADWSGSFWATAFNDEAEKILGMSAEDIGILKENDSDTL
DDVYTKPLFMPSFFKCRGKKEIYNDEVKVRSVINAAGPVDYKLYLNHLMDEIKRLANVDV
NME
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatttgtcggaaggagcattggacgctatcatggctggggagacagtcgaaggt
ccaatcgtgcaaatattgggacacaaaaaattggctagttctaccagcggtgaacgctac
agacttctactctccgatggaaaaagaatcaattcacttaccatgcttgctactcaactc
aatcatatgattgatactgaacttacagagtttgccatttgcaaaattaatcgctatgcc
atgagcaacgtcaacaatgctggaaaacctaaacgtgtcatggtcattttaaacatcgaa
gtcaaaactcctggtagcgaagttggtggaaagattggaaatccgacacaactcgatgca
caacctgaaacggaacaagcatcagctgctcctcaatccaagccgcaagcaccaccacct
tccccaaaaacgtcagcagccgctggcttccagagaaaacgtcttgatgaatcagtatcg
gcaggctctgatatcacgactacaccaattgccgctcttagtccatatcaaaatagatgg
gttatcaaagcgagggttaccaacaaaccaggaataaaaacgtggagtaactcacgagga
gaaggtactttgttctcgatggatcttgtggacgaaagtggcgaaataagatgcaccgcg
ttcagggaacagtgtgacaagttttacaacatgattgagattggaaaagtttattacata
tcgcggtgcgcattgaaaccagcgaacaagcagttttcaacattgaagaaccagtacgaa
atgacgatgaccaacgacaccgaagtcgttgcgtgccacgacgaggttgatgacattcca
gcgatatcgttcgattttcagccgctcagtgaggtcgagaccaaagaaaagaacaccgtt
atggatgtattgggtatcgtgaaatcttatgacgatgtacagactctagttgcaagaaac
actggaagagaactccggaaacgagacgtacaattagtcgacatgagcaacgttgcggtt
actcttactctctggggttctcaagcagacgacttcagccctgttgacaaccccgttttg
gctgtcaaaggtgcacgcatcggtgaattcaacgggggcaaaaatttgtcgactctccaa
tcctctactcttcaattggatccggatcttcctgaagctcacagattgcgcggttggtac
aacacaacaggcaaagaacaagaatgcaaattcatatcgaaggctggtggcggttcgttg
aacgctccattgacaacggctttcgaagcaatgaataagtgtcagcagttgacggacggt
caagaaactttcatgatcaaaggttgcataagtttgatacgcacagaaaatgcattatac
aaatcttgcccgacggaggcgtgcaagaagaaactcgttgatcaggcaaacggaatgtac
cggtgcgagaaatgcgacagagaatttccaaacttcaaatatcgattattgattaacttg
aacgttgctgattggagcggtagtttttgggctacggcattcaacgacgaggctgaaaaa
atattgggtatgtcggctgaggatattggtatacttaaggaaaacgattctgacacgttg
gatgacgtctataccaaacctctctttatgccctctttcttcaagtgcagaggaaagaaa
gagatttacaacgacgaagtgaaggtgcggtcagtcattaacgctgcgggaccagtcgac
tacaaattgtatctgaatcatttgatggatgaaatcaagagacttgcaaacgttgatgtc
aacatggaataa
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