Venturia canescens: 122419423
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Entry
122419423 CDS
T09386
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
vcan
Venturia canescens
Pathway
vcan03460
Fanconi anemia pathway
vcan04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122419423
09124 Replication and repair
03460 Fanconi anemia pathway
122419423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vcan04121
]
122419423
03400 DNA repair and recombination proteins [BR:
vcan03400
]
122419423
Enzymes [BR:
vcan01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122419423
Ubiquitin system [BR:
vcan04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122419423
DNA repair and recombination proteins [BR:
vcan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
122419423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
SLX1_C
zf-RING_2
PHD_NSD
zf-HC5HC2H
zf-ANAPC11
zf-rbx1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
122419423
NCBI-ProteinID:
XP_043289903
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All DBs
Position
1:7324803..7327676
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AA seq
385 aa
AA seq
DB search
MEESAEIIKSHPGLVLVSEHPVTWKGFLVVDTSLGFAIDITLTLPFYPQLTDANLFFGQS
ISLLHGTDFTDKILRLLENATTVSSLLFQLKRIVTNLLKEKFDLTNNTTTSLQGDVVDEI
REALRTNSPVKVSASNGLKAVKLSLDDVVVIISKDSGTNMWKVISSDLPELPMLEQFELN
LKNLSTAMEKLHTQVNMLEDAWNVLHEIDNTCWVVDPRVPKPYHLYRRVNLTSSLSALIT
IDPINFCELPDIKLLGSDSDVAKYRNIMSRNLMKWDPESAIADNLRILFAIDELPQPPEE
EKTKDENAIVEDDECSICFAMELDEHTPPLLPVEICSNEKCRKHFHTMCLRQWLQAIASN
QVSFDRIHGTCPNCSESISCSLVST
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaagtgcggaaataataaaatctcatccgggactcgttctcgtctccgaacat
cccgtaacctggaaaggcttccttgtcgtcgacacgagtttaggattcgctattgatata
acactcactctgccgttttatccacaattgaccgatgccaatctttttttcggtcaaagt
atttcgcttctccatggtaccgatttcaccgataaaattctcaggctgttagaaaacgca
actaccgtatcgtctttgctctttcaattgaaaagaattgtgacaaacctgttgaaagaa
aaatttgacctgaccaacaatacaacaacaagtttgcaaggtgacgttgtggatgaaatc
agagaagcacttcgtacaaattctccagtcaaagtatctgccagtaacggcttgaaagca
gtaaaattgtcgttggacgatgttgttgttattattagtaaagattcaggaacaaacatg
tggaaagttatatcatctgatttgccagaattgcctatgttggaacaatttgaattgaat
ttgaaaaatctgagcacagcaatggaaaaattgcatacgcaggtgaatatgttggaagat
gcctggaacgtacttcacgaaattgacaacacatgctgggttgttgatccacgagtacca
aagccttatcatctctacagacgagtgaatttgacatcttcattgtcagctcttataacc
attgatcccattaatttctgtgagctaccagacatcaaacttcttggcagtgacagtgac
gtagctaaatacagaaatatcatgagcagaaaccttatgaaatgggatccggaaagtgca
atagcagataatttgcgaatactttttgcaatcgacgaattgcctcaaccaccagaagaa
gaaaaaacaaaggatgaaaacgctattgttgaggatgatgagtgtagcatatgctttgcc
atggaacttgacgagcacactccacctttgctacctgttgaaatatgcagtaatgaaaag
tgcagaaaacattttcacaccatgtgtttacggcagtggctacaagcgattgctagtaac
caagtatcatttgaccggatccatggaacatgtccgaattgcagtgaaagtatttcgtgc
tcgctcgtgagcacatga
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