Venturia canescens: 122419493
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Entry
122419493 CDS
T09386
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B isoform X1
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
vcan
Venturia canescens
Pathway
vcan04080
Neuroactive ligand-receptor interaction
vcan04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122419493
04082 Neuroactive ligand signaling
122419493
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vcan04040
]
122419493
Ion channels [BR:
vcan04040
]
Ligand-gated channels
Glutamate (ionotropic)
122419493
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
122419493
NCBI-ProteinID:
XP_043290041
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Position
1:1458628..1647243
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AA seq
1122 aa
AA seq
DB search
MRPLFPLLVVFSCLPLAARASESFRGSSGVIRGESSIKIGTGTSSRGSGTGRGNSGVRIG
EGKNPSSTRQRIIPPTTTTTTPQPHYVQPTPPHSSNSAKNASKIYLKVGMVVPYKFFGTR
EYTKAAMTAIHGLQKSARGPRLELFNFYDFNVIIDMKELTPSPTNILDSLCDHFLTVNVS
AIIYLMNYEQYGRSTASAQYFLQLAGYLGIPVIAWNADNSGLERRASQSSLQLQLAPSLE
HQTAAMLSILERYKWHQFSIVTSQIAGHDDFIQAVRERISDMQDTFKFTILNAVLVTKKD
DLVELVNSESRVMLLYSTREEASQILSDAREYKITGENYVWVVTQSVIENLQTPNQFPVG
MLGVHFDTSTASLVNEIATAIKVYAYGVEDFVNDPKNDNHTLHTALSCEGIGESRWNTGD
RFFKYLKNVSVEGDQGKPNVEFTQDGVLKAVELKIMNLRPGVSKQLVWEEIGVWKSWQKE
GLDIKDIVWPGNSHTPPQGVPEKFYLKITFLEEPPYINLAPPDPVSGKCLMDRGVHCRVA
KESDMVGMDIQSAQRNESFYQCCSGFCIDLLQKFSEEIGFTYELVRVEDGKWGTLENGKW
NGLIADLVNRKTDMVLTSLMINSEREAVVDFTVPYMETGIAIVVAKRTGIISPTAFLEPF
DTASWMLVGIVAIHAATFVIFLFEWLSPFGFDMKVNPSPNHRFSLSRTYWLVWAVLFQAA
VHIDSPRGFTARFMTNVWAMFAVVFLAIYTANLAAFMITREEYHEFSGIDDPRLSKPWTH
KPMFKFGTIPWSHTDSTLAKYFAEMHNYMRKFNKSSVYGGIDAVVSGDIDAFFYDGTVLD
YLVAQDEDCRLLTVGSWYAMTGYGLAFARNSKYLPMFNKRLLDYRENGDLERLRRYWMTG
TCKPGKEVQKSSDPLALEQFLSAFLLLMAGILLAATLLFLEHLYFKYVRHHLARSDKGGC
CALISLSMGKSLTFRGAVFEAQDILQHHRCRDPICDTHLWKVKHELDIARLRIRQLEKDL
EAHGIKPSQARRKPGRMGWWQGCLQSSDYQTSGNQLAVEAPHPLPPYFDSYLDTVEVAKP
RDMTRNHVVSTEYADGFLPTEIYKASEEESTRTEIAEIETVL
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccattatttccactgctggtggttttttcgtgtctcccactcgctgctcgggct
tccgaaagttttcgtggaagcagcggagtgataagaggcgagagtagtatcaagatcggc
actggcacgagttcccgtggcagtgggacgggaagaggcaattcgggggtgcgaataggt
gaaggcaaaaatccatcttcaaccaggcaaagaataataccgccgacgacaacgacgacg
acgccgcagccgcattacgtacaaccgacaccaccacattcatcgaactctgcaaaaaat
gcgagcaaaatttacttaaaggtggggatggttgtcccgtataaatttttcggtacccga
gaatatacgaaagcggcaatgacagcgattcatggactgcagaaaagcgcaagaggaccg
aggttggagctgttcaacttttacgacttcaatgtgataatcgacatgaaagaattgacg
ccaagtccgaccaacatactcgattccctctgcgatcattttctaactgtcaatgtttcg
gcgataatctacctcatgaactacgagcagtatggtcgtagcacagccagcgcacagtat
tttcttcagctggctggttatcttggaattcctgtgattgcgtggaatgctgacaattcg
gggctcgaaaggagggcgtcgcagagcagtttgcagctgcaactggcaccttcactggag
caccaaacagccgcaatgttgagcatactcgagcgttacaaatggcaccaattcagcatc
gttacgtcacagatagccggacacgatgattttatacaggctgttcgagaaagaatatcc
gacatgcaggacacgttcaaattcaccatactgaatgctgttctcgtcactaaaaaggac
gatctcgtcgaacttgtcaacagcgaatcaagggtcatgctcctctactcgacgcgggag
gaagcctcgcaaatcctgtcggatgccagagaatataaaatcactggtgaaaattacgtt
tgggtcgttacccaaagcgtcatcgaaaatctccaaacaccgaatcaatttccagttgga
atgttaggtgttcactttgatacgagcaccgccagccttgtgaatgagattgcaaccgcg
ataaaggtttatgcctacggtgtcgaggactttgtaaatgatccgaaaaatgataatcat
acgttacacaccgctcttagctgcgagggtattggcgagtcacgttggaacacgggagat
cgatttttcaaatacttgaaaaatgtatcggtcgaaggtgatcaagggaagccaaacgtc
gagttcactcaggacggtgtcctgaaagctgtagaattgaaaattatgaacttacgaccg
ggagtcagcaaacagctcgtctgggaagagatcggagtttggaaatcgtggcaaaaagaa
ggtctcgatataaaagatattgtctggccgggcaattcccacacaccgccgcagggggtt
ccggaaaagttttatttgaaaataacgtttctcgaagagccgccgtacattaatctcgca
ccaccagatcccgtgagtggaaagtgcctaatggatcgtggagttcactgccgagtcgcc
aaggagtccgacatggttggaatggatatacagtcagctcaaaggaacgagagtttctat
cagtgctgcagtggattctgcatagatctgttacaaaaattctctgaagaaattggattc
acgtatgagctcgtgagggtggaggatggaaaatggggaacgctcgagaacggaaaatgg
aacgggctcatagcggatcttgtcaaccgcaaaaccgacatggtgcttacctccttaatg
attaattccgagagggaagcggtcgttgactttacggtgccttacatggaaactgggatt
gcgatcgtcgtcgctaagagaactggaatcatctcgccaacagcgtttttggagcctttt
gacacggcctcgtggatgctcgtgggaatcgttgccatccacgcagcaacatttgtcatc
tttcttttcgagtggctttcaccatttggtttcgacatgaaggtgaacccctcgcccaat
catcggttttcactgtccagaacttattggctcgtttgggctgtactgtttcaagctgcg
gttcatatcgactctccaagaggatttacggctcgcttcatgacgaacgtgtgggccatg
ttcgctgtagtgtttcttgccatctacactgccaacttagcagccttcatgataacccgg
gaagagtatcacgaattttcgggaatcgatgatccgagactctcgaaaccgtggacccac
aaaccaatgttcaaattcggcaccataccgtggagtcacactgacagtacactcgctaaa
tatttcgctgagatgcacaattacatgagaaagtttaataaaagcagcgtatatggaggc
atcgacgcggtagtgagtggtgacatagatgcgtttttctacgatggaactgtcctcgat
tacttggtagcgcaggatgaagactgcagattattgacagttggatcttggtacgcgatg
accggttacggcctcgcattcgccaggaactccaaatatttgccgatgttcaacaaaaga
ttgctcgattatcgagaaaacggtgatctcgaacgtctcagacgatattggatgacgggg
acatgtaagcccggcaaagaagtacaaaaaagctcggaccctttggctctcgaacagttt
ttaagcgcttttcttctcctcatggccggaattttgctcgcagcgacacttttgtttctc
gaacatctttacttcaagtacgtgagacaccatcttgcgagaagcgataaaggtggctgc
tgcgctctcatcagtttgagtatgggaaagtctctgacgtttcgaggtgcagttttcgaa
gctcaagacattctgcaacatcacagatgcagagatccgatctgcgatacacatttgtgg
aaagttaaacacgaattggacatagctcgactaaggataaggcaactcgagaaagatctt
gaggctcatggcatcaaaccatctcaagcgaggaggaaaccggggaggatgggatggtgg
cagggatgtctacagtcctcggattatcagacatccggtaatcagctggcggtcgaggcg
ccacaccctctgcccccttactttgactcatacctcgacacagtcgaagtggccaagcca
agggacatgacgcgaaaccacgtcgtcagtacggagtacgcagacggttttttgccgacg
gaaatttacaaggcttcggaggaagagtcgacgcgaacggaaatagcagaaatcgagaca
gttctgtga
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