Venturia canescens: 122419530
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Entry
122419530 CDS
T09386
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcan03009
]
122419530
Enzymes [BR:
vcan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122419530
Ribosome biogenesis [BR:
vcan03009
]
Eukaryotic type
Pre-60S particles
Helicases
122419530
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
122419530
NCBI-ProteinID:
XP_043290105
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All DBs
Position
1:11734704..11738122
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AA seq
597 aa
AA seq
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MAVSKINLKNKKFTELGVTLSASVTKTLRKLKFLTSTPVQAACIPLLLSGKDVAAEAVTG
SGKTLAFLIPLLELLQRREEKWKATEVGAIVISPTRELATQISEVLSHFLQNIPQLTQIL
LVGGTTVKEDVVRLKDGANIIIATPGRLEDLLSNCKSINLAANVKSLELLVLDEADRLLD
LGFSATLNTILSFLPRLRRTGLFSATQTKELQQLIRAGLRNPALVSVKEKSTFSTPLTLS
NYYVLVQAENKLATMIDFVRLKGDNLKYMIFFSTCACVDYFSHVIQSMLPSTRVLALHGK
MKSKRHKVFDEFRNIPSGLLVCTDVMARGIDIPEVDWVLQYDPPSTASSFVHRCGRTARI
GKEGNALLFLLETEDAYIEFIKRNQKVELEKLELTAEPETSLNCVKTMKMLQMQDRLVFD
KANRALVSYIQSYQKHECNLILRLKDLDLGKVGMGFGLLKMPRMPEIKGRDVSSFVETDV
DLNSIGYKDKQREQNRLAKLSEYRETGIWPGKNKRRVKQTEPWSEAKKRKIERQEKRGKK
REKKNEKMEKGCVKKAKKNKVVSAEDIAELAQDIALMKKLKKKKISREEFDEAFGIT
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcagtttctaaaattaatttgaaaaataaaaaatttacggaattgggtgtaactttg
agtgcttcagtgacgaaaacactaagaaaactcaaattcctaacctctacgccagtgcag
gctgcctgcatacctcttttgttgtctggtaaagatgttgcagcagaagctgttacagga
agcggaaaaactcttgcatttcttattccccttttggagttactgcagagacgtgaagaa
aaatggaaagcaactgaagtaggcgctattgttatctctcctacccgagagctggccact
cagattagtgaagttttgtcacacttcctgcagaacatacctcagcttacacaaattctt
cttgttggtggtacaacggtaaaagaagatgttgttagactcaaagacggagctaacatc
ataatagcaactcctggccgattggaggatttgttgtctaattgcaaaagcattaatttg
gctgcaaatgtcaaatcattggaacttctggtattggacgaggctgatagactcttggat
cttggatttagtgcaacattgaacacaattctaagtttcctaccaaggctaagacgaact
ggacttttctcagcgacacaaactaaagaattgcaacaattgattagagctggtcttaga
aatcctgccctcgtatcagtgaaagaaaaatcaactttttcgacacctctgactttgagc
aattattacgtacttgttcaagctgagaacaaattagcaaccatgattgactttgtgaga
ctcaaaggcgacaatttaaagtacatgatatttttttcgacttgcgcctgtgtcgactat
tttagccacgtcattcaatcaatgttgccgagcacaagggtactggcattgcacggtaaa
atgaaaagcaagagacacaaagttttcgatgaatttcgtaatattccgagtggcttgctc
gtgtgcacagacgttatggcaagaggaatcgatataccggaagtggattgggttttgcag
tacgatccaccatcgacagcgagtagcttcgttcatagatgtggcagaactgctagaatt
ggtaaagaaggaaacgcgctactttttcttctcgagaccgaggatgcgtacatcgaattt
atcaaaagaaatcaaaaagttgagctagaaaaactcgaattgacagcggagcctgagaca
tcgttaaattgtgtaaaaacaatgaaaatgcttcaaatgcaagatagactcgtgttcgac
aaggcaaatcgtgcacttgtgtcttacatacaaagttatcaaaagcacgaatgcaatctt
atactccgactgaaagatctcgatcttggtaaagtcggtatgggttttggtcttttgaaa
atgccgcgaatgccagaaatcaaaggtcgcgatgtttccagtttcgtcgaaactgacgtc
gatctcaatagcattgggtacaaagacaagcaacgcgaacaaaacaggctggcaaaattg
tccgagtatcgtgaaacagggatttggccaggaaagaataaacgtcgtgtgaaacaaacg
gaaccttggtccgaggccaaaaaacgaaagatcgagagacaggaaaaacgaggaaagaag
agggagaaaaagaatgaaaaaatggaaaaaggctgcgtgaaaaaagcgaagaaaaataaa
gtcgtcagtgctgaagacatcgcggaactagcccaggacatcgcattgatgaaaaaattg
aaaaagaaaaagatatcgcgggaggaatttgacgaggcgtttggaatcacgtaa
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