Venturia canescens: 122419537
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Entry
122419537 CDS
T09386
Name
(RefSeq) nuclear RNA export factor 1-like isoform X1
KO
K14284
nuclear RNA export factor
Organism
vcan
Venturia canescens
Pathway
vcan03008
Ribosome biogenesis in eukaryotes
vcan03013
Nucleocytoplasmic transport
vcan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122419537
03015 mRNA surveillance pathway
122419537
03008 Ribosome biogenesis in eukaryotes
122419537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcan03019
]
122419537
03009 Ribosome biogenesis [BR:
vcan03009
]
122419537
Messenger RNA biogenesis [BR:
vcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122419537
mRNA cycle factors
Stress granule specific factors
122419537
Ribosome biogenesis [BR:
vcan03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
122419537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
Tap-RNA_bind
NTF2
LRR_8
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
122419537
NCBI-ProteinID:
XP_043290127
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All DBs
Position
1:7247273..7249860
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AA seq
478 aa
AA seq
DB search
MAGQTQPLTSKKAVVLDFSSAIKLSIGSQMTTERALMAKNDAWHRIMITRGAKYDREMIL
RTIVSAVEPADLIPVRYQVVGEDAYFIARNCGAALETLCRSNLIISIPNGDSIILTVTLA
FASIHELKINIQPIVLAALTRRYNSDLKYLNLDNFHRDPEVERTVYCPLSQPKTLSHTLK
LAKTALGPVEHLSLKRNNLTHLHAMENSNLMSLKSLDIRHNNLLVMNPLSSLKNLSIEEL
LLDGNPLCENYATEKRYIEAAKLYCPHLKKLDGVDLEPLKLPTFRDNYYQQGSVSRKIVD
QFLTHFFGIYDYEDRSLLSPLYSRNSLYSLTLGITAECQKHANFGAFSSENRNLLDTRDL
RKFRRLLYHGGEEIVNAFKKLPETLHDRRNFRYDVMWEDHRRLLVSIEGMFKTTSNSSVP
NGIYAFSRTFLLVGRVDNEYNVLNDQYHISVPHPLAMVFFDLDNSAFKETNGNKNTLF
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcaggccaaacacagcctttaacttcaaagaaagcagtggttctggatttttcgtca
gcgataaagctatccatcggcagtcaaatgacaaccgagagagcattgatggcaaaaaac
gatgcttggcacaggatcatgataacaagaggagcaaaatatgacagagaaatgatactg
agaacaatagtgtctgcggtggaaccagctgatttaatcccagtaaggtatcaagtggtc
ggagaagatgcttatttcatagccagaaattgtggtgcagcattggaaactctgtgtcgc
tcaaatttgataataagcataccaaacggggattcaataattcttacagtaaccctagca
tttgcctcgattcatgaacttaaaataaacattcaaccaattgtgcttgcagcgctgaca
agacgatacaattccgatttgaaatatttgaatctggataatttccatcgagatcctgaa
gttgaaaggactgtttattgtccgttatcgcaaccaaagacattgagtcatactctcaag
cttgcaaaaacagctctcggccctgtggaacatcttagtttgaagcgaaacaatttgaca
catttacatgcaatggagaactctaatttaatgtctctgaaaagtctggacatacgtcac
aacaatttattagtcatgaatcctctcagttctctaaaaaatctttccatagaggaattg
ttgctagatggcaatccgctttgtgaaaattatgctactgaaaaaagatacatagaagcg
gccaaactgtattgcccacacttgaagaaactcgacggtgtggacctcgaaccgcttaaa
ttgccaacctttcgtgataattattaccaacaaggcagcgtctcgcgaaaaatcgtagac
caatttttaactcacttttttggtatctatgattacgaagatcgttctttgctctcacct
ctctattctagaaattcgttgtattccttaactcttggaattactgcagaatgtcagaaa
catgctaatttcggtgctttctcatcagagaatcggaatttactggacacacgggatttg
aggaaattccgaagattactttatcacggaggtgaagaaatagtgaatgctttcaaaaaa
ctgcctgaaactctccacgatcgaagaaacttccgctatgatgttatgtgggaagatcat
cgacgtctacttgttagcatcgaaggaatgttcaaaacaacttctaattcttccgttccg
aatggcatttacgctttctcgcgtactttcctcctggttggacgagttgacaacgagtac
aatgttctcaatgatcagtatcatatttccgttccacatccactcgctatggtgttcttc
gatttagataattctgcttttaaagaaactaatggtaataaaaatacacttttttaa
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