Varibaculum cambriense: CYK25_000160
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Entry
CYK25_000160 CDS
T09090
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
vcb
Varibaculum cambriense
Pathway
vcb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CYK25_000160
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
CYK25_000160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcb02000
]
CYK25_000160
Transporters [BR:
vcb02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
CYK25_000160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
WIK88686
LinkDB
All DBs
Position
34262..35416
Genome browser
AA seq
384 aa
AA seq
DB search
MKKRALLIAAALAIVGSTTACTVESGSSEKADTQVASKADAALKEVEGKVFSKGPNGETP
VTAKAVELTDDEIAQVKAKKATAALVMHYAGNDWANAQIAGLKAEFARLGIDVIAVTDAN
FNPGQQVSNIETVLAKNPDIVVSIPTDPVATAGAYRKVAESGAKLVFMDNVPKGLKAGVD
YESIVSADNFGNGVVSAHLLAKALAGKGEIGVIYHSADFFVTRQRYEGFTKVIEEEYPDI
KIVKKQGIAGPDFAGDAQKVADAMISQNPKLAGIWAVWDVPAEGVMAAARSAGRTDLKIA
TEDLGTNVAIALAQDQLVVGLGAQQPYQQGVAEARIGAGALIGKKAPSYVALNALPVSHE
NVLKAWKQVYNTEPPADLKKAMKK
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaagagcattgcttatcgctgctgctttggcaattgtcggcagcactacggct
tgcacagtagagtccggaagcagcgaaaaagctgacactcaggttgcaagcaaggcagat
gccgctctcaaggaagtagagggcaaagtgttcagtaaggggccgaacggggagactccc
gtcacggctaaggctgttgaacttaccgatgacgaaatagcacaggttaaagcaaagaag
gccaccgcggccctcgtgatgcactacgctggcaacgactgggctaatgcccagatcgcg
gggcttaaagccgagttcgctcggttaggcatcgacgttatcgcggtcaccgacgcgaac
ttcaacccgggtcagcaggtatccaacatcgagacggtgctcgccaagaacccggatatc
gtggtgtctattcctaccgacccggtagctaccgctggcgcatatcgcaaggtcgcggaa
agcggcgcgaagctcgtgttcatggacaacgttcccaagggattgaaagctggcgtggac
tacgaatcgatcgttagcgccgacaactttggtaatggcgttgtttccgctcacctgctc
gccaaggctctagccggcaagggagagatcggagtcatttaccactccgcagacttcttc
gttacccgtcaacgctacgaaggtttcaccaaggttatcgaggaagaatacccggatatc
aagatcgttaagaagcaggggatcgccgggcctgatttcgctggagatgcgcaaaaggta
gccgacgcgatgatcagccagaaccctaagctagcgggtatctgggcagtatgggatgtt
cccgctgaaggtgtgatggctgctgcccgttccgcaggtcgtactgacctcaagatcgct
accgaggatctcgggacaaacgtggcaatcgccctggctcaagatcaacttgtagtcggt
ctcggtgcccagcagccgtaccagcagggtgttgctgaggctcgtatcggtgccggggcg
ctgattgggaagaaggctccctcctacgtagcgctaaatgctttgccggtctcgcacgag
aacgtgcttaaggcatggaagcaggtctacaacactgagcccccagctgatctgaagaaa
gcgatgaagaagtga
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