Varibaculum cambriense: CYK25_000320
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Entry
CYK25_000320 CDS
T09090
Name
(GenBank) ABC transporter permease
KO
K02004
putative ABC transport system permease protein
Organism
vcb
Varibaculum cambriense
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcb02000
]
CYK25_000320
Transporters [BR:
vcb02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Putative ABC transporter
CYK25_000320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsX
MacB_PCD
Methyltransf_34
DUF3675
Motif
Other DBs
NCBI-ProteinID:
WIK88715
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All DBs
Position
complement(65493..68048)
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AA seq
851 aa
AA seq
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MIRIAWRNLRAHLRRFQMSLLAVVLGVAFLSGIFALRATLADSYNSLVASTNTYQYYLVG
KTQGEKVEGQAPVRESLPLKTVHQAEKISGVKYADPYLVDVCMLADQDNKRLGKGGQVSV
LQVIYPGHAPQPRLLKGQAPHGEQEVALEESAAKRLGITTGQKLKVYVSSEGKTATVSGI
YRFPSPVSFTNYVFVDADGFVPLTQKPAPLATNAVGITAEKGISSQKLRASLNNEFSDTA
QVMSQAEYNDEINAAANSSLDFVNVFLLVFAAIALFVGAFIISNTFQMMVRAQQPQFAML
RAIGAGGGQVFSIVALQGLLVGTLGSLIGVGAGYLLTRVVSWGLAKAGFEALQIVWSWSI
TLLALTVGILVTVIGSLWPARSAALTPPVEAMRQNTQTQKPVWPRAIMGAVVLAFAVGLL
AWACSDSGQSGLRLGIGAALFLLAMLILVAPLSAVIVKALAGLIWWLRPHARLAMRTLTA
NLRQTANTAAALMIGVALVAVGATLAASTKASTKSVIDQQINADLVVSTDPTVVSLSPSL
LNKAAKVSGVEQVDLMTGIGLFRMTVPGKNPEQTMLQVTYPQFQRYIKVDAITGSTADYF
SQPPSSPRALVSSAWAKSQGLAPGDKIQLGGIHGAETVTIAATVDTGFIFLDVMVPHSLA
SKLGPEAADITTSAAIEIKDGADRAQVQREVQKVVTKNPFMVVQTHKEAADRVAATVDQV
LSVLYALLALSLVIAALGIMNTLSLSVQQRFRELGLIRTVGLSSRGLSLMITVESVLITL
AGTLLGIGGGVCLAVFLCRYLADRGISIIEIPWGSLGLICLLAVLVGTIAALLPARRARR
MPVLEAISTND
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgattaggatagcttggcgcaacttgcgtgcccacctgcgacgtttccaaatgtcgcta
ctggcggtggtactaggagtggctttcttatcgggaatttttgcgctgcgcgctaccctg
gccgattcctataattctttggttgcgtccaccaatacctatcagtattacctggtagga
aaaacgcagggcgaaaaagtggagggacaggctcccgtgcgagaaagcctacccctaaag
accgtgcaccaagcagaaaagatatcaggggtcaagtatgccgacccataccttgtggac
gtgtgcatgttggctgaccaggacaataagcgtctgggtaaaggcggacaagtctccgtt
ttgcaggtaatttatccggggcacgctccccagcctcgcttgttaaaaggacaagctccc
cacggtgaacaagaagttgctctagaagaatctgcagctaaacgcctaggcataactacc
ggccaaaagctgaaggtttacgtttctagcgaaggtaaaaccgctaccgtcagcgggatt
tatcgcttcccctccccggttagcttcaccaactatgtctttgtcgatgctgatggcttc
gtgcccctcacccaaaagcctgcgccgctagccaccaacgctgtcggtatcaccgctgaa
aaggggatatcctcccagaagctgcgcgcctccctcaataacgagttttcggatactgcg
caagtaatgagccaagccgaatacaacgatgaaataaacgcggcagctaatagctcccta
gattttgtcaacgtattcctgctggtattcgcggcaatcgccctatttgtaggggcgttt
attattagcaacactttccaaatgatggtgcgcgcccagcaaccacaatttgcgatgctg
cgagcaatcggagctggcggaggacaagtcttttcgattgtggcactgcaaggtttgcta
gtgggcaccctaggttccctgatcggggtaggagccggatatctactcacccgcgtggtt
tcctggggtttggcgaaagccggattcgaggcattacaaatcgtctggtcatggtcgatt
accctcctggctttaacagtgggcattctggtgacggtaatcggttccctctggcccgcc
aggtcagcagcgctaactcctccggttgaggcgatgcggcaaaacacgcaaactcaaaag
ccagtgtggccccgcgcgattatgggagcggtggtactggcgttcgcggtaggactgctg
gcgtgggcctgttctgatagcgggcaaagtggcctgcggctagggatcggcgccgcacta
ttcttgctggctatgctgattttagttgctccgctatcggcagtaatagttaaagcctta
gcgggacttatctggtggttgcgtcctcatgcccgcctagcgatgcgcaccttgactgcc
aacctgcgacaaactgccaatacggccgccgccctgatgatcggggtggccctggtagca
gtgggagcgacattggctgcctctactaaagcctccaccaaatcggtaatagatcagcag
ataaacgccgatttagtggtcagtacggatcctactgttgtttcactttctcctagcctt
ttaaataaagccgccaaagtgtctggggtagaacaggttgatcttatgaccgggatcggt
ctgtttaggatgacagttccggggaagaatccggagcaaaccatgttgcaagtgacctat
ccgcagttccagcgctacataaaggtggacgccattaccggttcaaccgcagactatttc
tctcagccaccctcgtctcctagggcgctggtttctagcgcttgggctaaatctcaaggg
ctcgccccgggggacaagattcagctaggcgggattcacggggccgaaacagttaccatc
gctgccactgtcgacaccggattcatattcctggatgtgatggtacctcactccctggcc
agcaaactaggtccagaagcagccgatattactaccagcgccgccatcgagattaaagat
ggggctgaccgggctcaagtacaacgcgaggtacaaaaagtagttaccaaaaaccccttt
atggtggtacaaacccataaggaagcggcagatagagtggcagctacggtagatcaggtt
ttgtcagtcctgtacgccctgctcgcattatcactggtaatcgccgctttagggattatg
aatacgctatcgctttcagtacagcaacgctttagagaactggggctaatccgcaccgtg
gggctttcttcccgggggctatccctgatgattaccgtcgagtcggtgctgattacgctg
gcaggtaccctcctggggataggtggcggggtctgcctggcagtgttcctttgccgttac
ctagccgaccgggggatcagcattatcgagataccctggggctcgctagggttaatttgt
ttgctggcggtactggtgggaacgattgccgcgctactgccggcacgtcgcgctcggagg
atgccggtcttagaggcgatctccactaacgattag
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