Varibaculum cambriense: CYK25_000565
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Entry
CYK25_000565 CDS
T09090
Name
(GenBank) pyridoxal phosphate-dependent aminotransferase
KO
K00812
aspartate aminotransferase [EC:
2.6.1.1
]
Organism
vcb
Varibaculum cambriense
Pathway
vcb00220
Arginine biosynthesis
vcb00250
Alanine, aspartate and glutamate metabolism
vcb00270
Cysteine and methionine metabolism
vcb00330
Arginine and proline metabolism
vcb00350
Tyrosine metabolism
vcb00360
Phenylalanine metabolism
vcb00400
Phenylalanine, tyrosine and tryptophan biosynthesis
vcb00401
Novobiocin biosynthesis
vcb01100
Metabolic pathways
vcb01110
Biosynthesis of secondary metabolites
vcb01210
2-Oxocarboxylic acid metabolism
vcb01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09100 Metabolism
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CYK25_000565
00270 Cysteine and methionine metabolism
CYK25_000565
00220 Arginine biosynthesis
CYK25_000565
00330 Arginine and proline metabolism
CYK25_000565
00350 Tyrosine metabolism
CYK25_000565
00360 Phenylalanine metabolism
CYK25_000565
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
CYK25_000565
09110 Biosynthesis of other secondary metabolites
00401 Novobiocin biosynthesis
CYK25_000565
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vcb01007
]
CYK25_000565
Enzymes [BR:
vcb01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.1 aspartate transaminase
CYK25_000565
Amino acid related enzymes [BR:
vcb01007
]
Aminotransferase (transaminase)
Class I
CYK25_000565
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Aminotran_5
DNA_Packaging_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WIK88758
LinkDB
All DBs
Position
complement(135147..136364)
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AA seq
405 aa
AA seq
DB search
MHKPQEHRISNRLAQISPSATLAVDAAAKELKAQGRPVIGFGAGEPNFSTPDYIVEAAQA
ACADPAMHHYSPGKGLPQLREAIAKKTLRDSGYEVDPNTEIIVTNGGKQAVFEAFSAIVE
VGDEVIMPTPYWTTYPEVIKIAGGVPVPVMAGADQHYKVTVEQLDAAKTEKTKALLVVSP
SNPTGAVYNANELKAIGQWALDNGIWVITDEIYEHLIYDGIHVEHIVKLVPELAKQTLVL
NGVAKTYAMTGWRVGWMIAPADVIKACAAFQSHTTGNVSNIAQRAALAAVSGPLDKVEQM
REVFDRRRQRMVELLRQVPDLEVPMPHGAFYCYPSVERILGRELAGETPQTSAELADLML
RKVEVAVVPGEAFGPSGFFRLSYALSDEDLEEGVGRIVDFLNQVK
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaaccgcaagaacacagaatttcgaatcgtctcgcgcaaatatctccctccgca
actttggcggtagatgcggccgcgaaagaactcaaagctcaagggcgtccagtcatcgga
tttggtgccggggagcccaacttttctacccctgactatattgttgaagcggcgcaggct
gcctgtgcggatcctgctatgcatcattacagcccggggaaaggcttaccccagttgcgg
gaagcgatcgcgaagaagaccctgcgggattctggctacgaagtagaccccaataccgaa
attattgttactaacggcggtaaacaggcagttttcgaagctttctcggcaatagtagag
gtcggcgatgaagttatcatgcccaccccctactggacgacttacccggaagttatcaaa
attgccggcggggttccggttccggtaatggcgggtgcagatcagcattataaagtcaca
gtcgaacagctggatgccgcaaaaaccgaaaaaactaaagctctgctagtggttagtcct
tccaaccctactggcgcggtctataacgcgaacgagttaaaagctatcggacagtgggcg
ctagataacgggatttgggtaattactgacgagatctatgaacacctcatctatgacgga
atccatgtcgagcatattgtgaaactggttccggaactggcgaaacaaactctggtacta
aatggggtagctaaaacctatgccatgaccgggtggcgagtaggttggatgatcgctccg
gcagacgtaatcaaagcctgcgccgctttccagtcccacaccaccggaaacgtctcgaat
attgcgcagcgggcggcactagctgccgttagcggcccgctcgacaaagtcgaacagatg
cgcgaagtatttgatcggcgacgccagcggatggtagagctgctacgccaggttcctgac
cttgaagttcccatgcctcatggcgccttctactgttaccccagcgtagaacggattttg
gggcgggaactcgcgggcgaaactccgcagacttcggccgagttggctgatctaatgctc
cgcaaagtcgaagtggcggtagttcccggcgaggccttcggtccttccggtttcttccgg
ctttcctatgcgttaagcgacgaggacttagaggaaggcgtcggccgaatagtcgatttt
cttaatcaagtaaaatag
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