Varibaculum cambriense: CYK25_001375
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Entry
CYK25_001375 CDS
T09090
Name
(GenBank) TrpB-like pyridoxal phosphate-dependent enzyme
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
vcb
Varibaculum cambriense
Pathway
vcb00260
Glycine, serine and threonine metabolism
vcb00400
Phenylalanine, tyrosine and tryptophan biosynthesis
vcb01100
Metabolic pathways
vcb01110
Biosynthesis of secondary metabolites
vcb01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CYK25_001375
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
CYK25_001375
Enzymes [BR:
vcb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
CYK25_001375
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Motif
Pfam:
PALP
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
WIK88886
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Position
306347..307651
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AA seq
434 aa
AA seq
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MTDNPRIQPLGFPIDSHIPARWYNLAADFPEPMPPYLNPQTREPITAKDLEPLFAPGLIE
LEMSKERYIDIPQRIRELYTNFRPAPLYRAHNLEQKLGTKCRIYYKYEGNSPAGSHKPNS
ALAQAYYNAVAGIKRLTTETGAGQWGASLAMACSMLGMECEVWQVRSSYDQKPYRRMQME
TYGAKCWSSPSDRTEAGRRIQAENPDTSGSLGMAISEAVESAVSDPQAHYALGSVMNQVI
IHQTVIGLESQAQLAKAGESGADFIFGCAGGGSNLGGLATPFIGENLREGKNSRVVACEP
AACPSLTQGEYRYDFGDMSGLTPLMKMYTLGHEFVPDPIHAGGLRYHGMAPMVSHAYHLG
LMEARAYPQEETFAAGLEFARAEGIIPAPESTHAVAGALDFIRSGEARDGQVLLIGLSGN
GVLDLAAYHQVLKK
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgactgataaccctagaatccaacctttaggatttccgatcgatagccacatccctgct
cgctggtacaacctggctgcggatttcccggagccgatgcctccctacctaaatccgcag
actcgggagcccatcaccgcgaaagatttggaaccgctatttgcgcccgggctcatcgaa
ctagagatgagcaaggaacgctatattgatattccccagcgaatccgggaactgtacacc
aatttccgtcccgcaccgctttaccgtgctcacaacctggagcaaaagctaggcactaaa
tgccgcatctactacaaatatgaaggcaattctccggccgggtcccataaaccgaactcg
gcattagcgcaggcctactacaatgcggtggccgggattaagcggctcaccaccgagacc
ggggcggggcagtggggtgcttccctggcgatggcctgctccatgctgggaatggaatgt
gaagtatggcaggtacgttcctcctatgatcaaaagccctatcggcggatgcaaatggaa
acttacggcgcgaaatgttggagttcgccctccgatcgcaccgaggcgggtcgccgtatc
caagccgaaaaccccgatacttccggttctctagggatggcgatttcggaggcagtggaa
tctgcggtttcggatccgcaggctcactacgctttgggctcggtaatgaatcaggtgatt
atccaccagacggtgattggtctggaatcgcaagcccaactggcgaaagctggtgaatcc
ggcgcggacttcattttcggttgcgctggcggtggctctaacctgggcggtctggctact
ccctttatcggcgagaatctgcgcgaaggtaagaactcgcgggtagtggcttgtgaaccg
gctgcctgtccgtcgcttacgcaaggtgaataccgctatgactttggggatatgtcgggg
ctgacgccgctaatgaagatgtataccctggggcatgagttcgtaccggatccgattcac
gctggtggtttgcgttatcacgggatggcgccgatggtgtctcacgcctaccacctggga
ttgatggaagcacgtgcctatccgcaagaagaaacctttgcagccggattagagttcgcg
cgcgccgagggaattattcccgccccggaatctacccacgcggtagccggcgcgctggac
ttcatccgctccggggaggctcgggatggccaggtgctcttgatcggactgtcaggtaac
ggggtgctggacttggcggcctatcaccaagtgctaaagaagtaa
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