Varibaculum cambriense: CYK25_001400
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Entry
CYK25_001400 CDS
T09090
Name
(GenBank) thiamine pyrophosphate-binding protein
KO
K02551
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:
2.2.1.9
]
Organism
vcb
Varibaculum cambriense
Pathway
vcb00130
Ubiquinone and other terpenoid-quinone biosynthesis
vcb01100
Metabolic pathways
vcb01110
Biosynthesis of secondary metabolites
vcb01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
CYK25_001400
Enzymes [BR:
vcb01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
CYK25_001400
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Gene cluster
GFIT
Motif
Pfam:
TPP_enzyme_N
TPP_enzyme_C
Motif
Other DBs
NCBI-ProteinID:
WIK88891
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All DBs
Position
312037..314205
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AA seq
722 aa
AA seq
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MSDVSCSLNPSRNQQNMEGAVENLGAATAFARLTVSELVRAGVRDFVICPGSRSAPLTYA
MAALTQAGAVRTHVRLDERSAAFFALGLAKSGIYKGEDATYTPVALVVTSGTAVAELHAG
LLEAFHCGVPLIALTADRPRTARGTGANQTTWQQGIFGAACPVALDIDASEDDLDTVKES
LSEAFDEAWGAGAQKRGQLCPLQLNLCFAPPLVSSTSWQIPAELQGLALGEAAIAASLEN
PLKTQVVAEDTGEAPRKIAKTLVVLADQCPPQVTRAAQKWGLPVLAEPTVTLKPGNAVQI
AHAPQVLPALAGEIEQIIVAGHATLSRPISALLSREDIPIYCLPSLGAKTNLTGKYMPTT
TAQVDTVFPAAASPAWLARWREVAQAVERAYRSCVDRRAVTVWQNANYAAFDPGDLPQVV
AEGQTAPSRNLKNHGFATSHEEGQNASEAAHRLRMPSPEDAPELGDNLRELEMGIDPFAL
ARIYEDVYEAWVNRDPDSARNGDLKADNARNSADSVGGAGSADSAGSVLAQPDGRKVSAA
GAPPLTMLGASNTIRAFDLAARGDRGISYCANRGLAGIDGNIATALGLAAGTGQAVRLIA
GDLTCLHDLTGLLTGQLEDTPTVQVMVLNDGGGRIFATLEHGELASPEVFERYFLTPQRF
DLSALAAGLGWDYRCAQDAEELKKILCEDPRREIVEINAYLPDLRVRRAALESEIRRELA
YL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgtttcttgctccttaaatccctcccgcaatcagcaaaatatggaaggggca
gtagagaatctgggtgctgccaccgcttttgcccgcctaacagtcagtgagctagtacgc
gccggggtacgcgatttcgtgatttgtcccggatctcgctccgcgcccctcacctacgct
atggcggcgttaacgcaggcaggggcggtgcgcacccatgtgcgtctggatgaacgctct
gcagctttcttcgctttggggctcgctaaatccggtatttataaaggcgaggacgcgacc
tacaccccggtagcgctggtagttacttcggggacggcagtcgcggagttacatgccgga
ttattggaggctttccactgcggcgtcccgttgattgccttgaccgccgatcgcccccgc
actgcccgcggcactggagcaaatcaaactacctggcagcagggaattttcggggctgcc
tgcccggtagcgctagatattgatgccagcgaggacgatctggatacggtaaaagaaagt
cttagcgaagcctttgacgaggcctggggtgcgggtgcccaaaaacgtgggcagctatgc
ccgctacagctgaatctatgtttcgcgccgcccttagtgagctccaccagctggcagatt
cctgctgaattgcaaggtcttgctttaggtgaagctgcaatcgctgcctccttagaaaac
cccttaaaaacgcaggtagtggcggaggatactggagaagctccccggaaaatcgcaaag
actctggtcgttttagcagatcagtgtccgccgcaggtgacgcgggcagcacaaaaatgg
ggactgccggtgttggcagaaccaaccgttaccttgaaaccgggcaacgcggtgcagata
gcgcatgctccgcaggtgcttcccgccctcgctggtgaaatagagcagattattgtagct
ggtcacgccactttgtcgcgtcccataagcgcgttgctttcccgggaggatattcctatc
tattgcttgcctagtttaggagcgaaaactaatctcaccggtaaatatatgcctaccact
accgcgcaggtagatacagtttttcccgcggctgctagccctgcctggttggcgcggtgg
cgcgaagtagcgcaagcggtggaacgtgcctaccgtagctgtgtagatcgccgcgcggtc
accgtgtggcaaaacgctaactatgcggcgtttgatcctggtgatcttccgcaggtagta
gcggaggggcagactgcgccctcaagaaacctaaaaaatcatggttttgcgacctcccat
gaagaggggcaaaacgcgagtgaagctgctcaccgtctccggatgccctcgcccgaagat
gccccggaactcggggacaatctgcgggaattagaaatggggatcgatcctttcgctctc
gcccgtatttatgaggatgtttatgaggcctgggttaatcgtgaccccgattcagcccgg
aacggtgatctgaaggctgataatgcccgtaacagcgcggatagcgtagggggtgcgggt
agcgcggatagcgcggggagcgtgctcgcgcaaccggacggtaggaaggtgagcgccgct
ggcgcccctccgctgactatgcttggtgcctctaataccattcgcgctttcgatttggcg
gcgcgcggagatcgcgggattagctattgtgcaaaccgcggtctggcgggtatcgatgga
aatattgctaccgctttggggctagctgccggaaccgggcaggcagtccggttgatcgct
ggggatttaacctgcctgcatgatttgaccggtttgctcaccgggcaattggaggacacc
ccgactgtgcaggtaatggtgctcaacgatgggggaggacgcattttcgctaccctggaa
cacggcgaacttgcgagcccggaagtcttcgaacgctatttcttaacgccgcagcgtttc
gacctctcggcgctggccgccggcctgggttgggattaccgttgcgcccaggatgcagaa
gaactgaaaaaaattctttgcgaggatccgcgccgggaaatcgtagaaattaatgcttat
ctgccagatttacgtgttcgccgcgccgccctggaatctgaaatccgccgggaactagct
tacctttaa
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