Varibaculum cambriense: CYK25_001430
Help
Entry
CYK25_001430 CDS
T09090
Name
(GenBank) IS30 family transposase
KO
K07482
transposase, IS30 family
Organism
vcb
Varibaculum cambriense
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
CYK25_001430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_38
HTH_23
rve
HTH_28
HTH_Tnp_ISL3
HTH_31
HTH_32
CENP-B_N
HTH_50
LZ_Tnp_IS481
Motif
Other DBs
NCBI-ProteinID:
WIK89664
LinkDB
All DBs
Position
complement(320589..321770)
Genome browser
AA seq
393 aa
AA seq
DB search
MCAARREHYVELLRQGLNFTQAAKAVGVSKRTGKVWRNGRTRSSGRNEKASVAWYCAKME
IPENAGPYYLGLQERIIIADRLHAGKSIRAIAAELGRAPSTISREINKHRSPLTGDYQPY
HADQQVAQARKRPKPAKINRSALLFQLVEDGLKKHWSPEQISGWLKKKYPDNPAMNMCVE
TIYQAIYVHARGQLKLEVKKMLRTGRVRRKPHKQPQQRTPRFKDPMTMIADRPAQVDERI
VPGHWEGDLICGAGNKSAIGTLVERKTRFTILLYLPNHHDAGSVQEAIVKKMQGLPKLLR
NSLTWDQGSEMALHKKITTSLDMDVFFCDPHSPWQRGTNENTNGLLRQYFPKATDLSQYP
EEYLDAVAEELNDRPRKTLEYDKPSERILKLLA
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgctgctcggcgtgagcattatgtagagcttttgcgtcagggactgaattttacg
caagcagccaaggcagtgggcgtttccaaacgtaccgggaaagtatggcgtaatggacgt
actcgctcgagcgggcgtaacgaaaaggctagcgttgcctggtactgtgcaaaaatggag
atccctgaaaatgctggaccatactatctaggcctgcaagaacgcatcattatcgccgat
agacttcatgcaggtaaaagtattcgcgcgattgccgcagagttaggcagggcgccctca
acgatcagccgcgagataaataaacatcgcagccctctaacaggggactatcagccatat
cacgctgaccagcaagtagcacaagccaggaaaagacctaagccagctaagattaaccgt
agtgcgctattgtttcaactggtggaggacgggttaaagaaacactggagcccggagcaa
attagcgggtggctgaagaaaaaatatcctgataacccggcaatgaatatgtgtgtagaa
accatttaccaagcgatctatgttcatgcccgtggacagttaaagctagaggttaaaaag
atgctgcgtacaggacgagtcaggcgtaaaccgcataaacaaccccagcagcgcacaccc
cgttttaaagaccctatgacaatgattgctgaccgcccagcacaggtggatgagcggatc
gtcccaggacactgggaaggggatttgatatgcggtgccggtaataagtccgcgattggc
acgttggtggagcgtaaaacccggttcacgattttgctgtatcttcctaatcaccatgat
gccggcagcgttcaagaagcaatcgtgaaaaagatgcaaggacttccaaaactactacgt
aactctcttacctgggatcagggatctgaaatggcgctgcacaagaaaatcactacctcg
ctagatatggatgttttcttctgtgaccctcattctccttggcaacgaggcacaaacgag
aacaccaatggtttgctaagacagtacttcccaaaagctaccgacctgtcccagtaccca
gaagaatatcttgacgcagtcgcagaagagctaaacgatcgaccacgcaagacgttagaa
tacgataaacccagcgagcggatcctcaaactgcttgcctaa
DBGET
integrated database retrieval system
