Varibaculum cambriense: CYK25_002180
Help
Entry
CYK25_002180 CDS
T09090
Name
(GenBank) hypothetical protein
Organism
vcb
Varibaculum cambriense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PQQ
PQQ_2
SopE_GEF
Motif
Other DBs
NCBI-ProteinID:
WIK89029
LinkDB
All DBs
Position
complement(481202..483385)
Genome browser
AA seq
727 aa
AA seq
DB search
MTPQPKTNRLLSRLGLLSVIILTFSMLSACQSVSLGGSSSKESNSYDPGNYQRLPYQQLA
AEYENGAAEVWRTQITHLKGTQITPFVSEDGETVAVALYTIPNENKSGVFSITGYDLASG
KQKWHKDFDGNDSTISAIDQIGPEACLPQAFGNHIVCNTGLIDISTGEVESLSEAAFGTF
PGSGQETQQLLFNTNDLAVLFHYQRDTTSNISVINPDNKVLWTKPVAIFSAQGISPICRF
ADKFAVCADPDGKVQILDLKTGKVKKELTQLKEDPDFHMFNVALQLDPDNEEIILCLPGA
DSACEKYKADGTQIDSEDFNLEMARRGAVTHDPMRVDELSYPATKEIPEIGATKSVQLNG
QDQDKQEIRATKTTGSQDLWLINHSGYNQWRASGGYLFLATASGTAKDANDPDDNGEYTD
SITTDFVFIPPLSKQYEVGKTTFGSGKNGTRVLRAGSFTGSGDGDLIGGAAEGVVKAGNS
ANGGNGKGKYGKYSSSSGTRLGENYLENSGAKIPELPIRSVAIANIDGVSSSQIRLTQQF
FDDLAAGNLERIRKSCWTMPAEVMDNRYFNDRLRGAILQAGAAGGRVVDGGAEWQGKYVS
VMFSQPELNSNYPCPAIRVGGKIDALSPADAVHVAKRVVGQIDGQPIHAHDDGRYETVCG
ASSSSQVKSVTQGGLVSKIREIAAGGGVSIKPLKQQKDDVLYRAKSGSATITLRQHLKTS
TYCIEPR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgactccccaacctaaaactaatcgtttactttcccgtttaggactgttaagcgtaata
atcctgactttctcgatgctttcagcttgccaaagcgtcagtcttggcggctcgtcctcc
aaggaaagcaactcttacgaccccggtaactatcagcgactgccctatcaacaattagct
gccgagtacgaaaacggggcggccgaggtttggcgtacccaaatcacccatctcaaagga
acgcagataacaccattcgtatcggaagatggggaaacggtagcggtcgccctctatacc
attcctaatgaaaataaaagcggagttttcagcatcaccggctacgatctagccagcggt
aaacagaagtggcataaagattttgatggtaacgactctacgatcagcgccattgatcag
ataggtcccgaggcttgcctgccccaagcctttggtaaccatatcgtttgcaataccggg
ttgatagatatttctaccggcgaggtcgagagtctttccgaggcggcattcgggactttc
cctggctcggggcaagagacccagcagctgcttttcaataccaatgacctggcagtcttg
ttccattaccagcgagatacaaccagtaacatttctgttattaacccggataataaggtg
ctctggaccaagccggtggcaattttttcagcgcaaggaatctctcctatctgccgattt
gccgacaaatttgcagtctgcgccgacccggatggaaaagtacaaatacttgatctaaaa
actggaaaggtgaagaaggaactcacccaattaaaagaggatcccgacttccacatgttc
aatgtcgccctgcaactagatcccgataatgaagaaatcatcttatgtcttccaggggca
gattcagcatgtgaaaaatacaaagcagatggcactcagattgactctgaagactttaac
cttgagatggctcgtcgtggcgcggttactcacgatcccatgcgggtagatgagttgagc
tacccggcaactaaagagatacctgaaatcggcgctactaagagcgtgcaactcaatggc
caggaccaagataaacaagaaattcgtgccaccaaaaccactggtagccaagatctctgg
ctcattaaccacagtggctacaatcagtggcgagccagcggaggctaccttttcttggca
actgccagtggaacagctaaagatgcgaatgatcctgacgacaacggagaatatacggac
agcattactacagatttcgtctttattcctcctcttagcaagcaatacgaagtagggaaa
actacttttgggagcggcaagaacggtacccgggtacttcgtgccggcagcttcaccggt
agcggagacggtgacctgatcggaggcgcagctgagggggttgtgaaggccgggaacagc
gccaatggtggaaacgggaaaggaaagtacgggaaatactcctcttcttcgggaacccga
ctgggggaaaactacctagagaattcaggagcaaagattcccgaactacccatacgttcg
gtagcaatcgccaatatcgacggcgtatcgtcctcccaaatccggcttactcaacagttc
tttgatgatttagctgccgggaacttagagagaatccgtaaatcctgttggactatgcct
gcagaagttatggacaatcgctatttcaatgaccggctccgcggcgcgattctgcaggcc
ggggcagcaggaggacgcgttgtagatggcggtgctgaatggcagggcaaatatgtttca
gttatgttctcgcaaccggaactgaactccaactatccgtgtccggcgattcgggtaggc
ggaaaaattgatgcgcttagccccgcggatgccgtccatgtggccaagcgagtagtggga
caaatcgatgggcaaccgattcatgcccacgatgacggtcgctacgaaactgtgtgtgga
gcttctagctctagccaagtaaagagcgtgacacagggaggtttagtctccaagatccgt
gagatagccgctggtggcggagtgtccataaaaccgctaaagcagcaaaaggacgatgtg
ctttatagagcaaaaagtggcagcgctaccatcaccttgcgccagcatttaaagaccagt
acttactgtattgaaccgcgttag
DBGET
integrated database retrieval system
