Varibaculum cambriense: CYK25_002205
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Entry
CYK25_002205 CDS
T09090
Name
(GenBank) glycosyltransferase family 2 protein
KO
K12990
rhamnosyltransferase [EC:2.4.1.-]
Organism
vcb
Varibaculum cambriense
Pathway
vcb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CYK25_002205
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vcb01005
]
CYK25_002205
Lipopolysaccharide biosynthesis proteins [BR:
vcb01005
]
O-antigen repeat unit
CYK25_002205
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Glyco_tranf_2_3
Glyco_trans_2_3
Glyco_tranf_2_2
Glyco_tranf_2_4
DUF7281
Motif
Other DBs
NCBI-ProteinID:
WIK89034
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Position
488232..489206
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AA seq
324 aa
AA seq
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MQDNRQGLSPDEEIVYAVVVTYEPDGRVADLLHSLTTQVEQIIVIDNGSSLDSLALLKAE
CSAEGALLTELNENTGIAHAQNVGINRALKEGADYVLLFDQDSLPQPDMVSRLVSFYTEM
NTKASAKRLPPIAAVGPCILDSKGKGSPLVYVKRRWAPGKAKSTELTRPAVPVAFLLASG
CLISKEALQTVGLMNEGYFIDHVDMEWCLRAEKQGYQLLVSTGSRLPHSFGDSTVAIPLL
KRKVHVHAPVRSYYVVRNTIALCRTSLMPWRWRVRYLLWLIPYSAVNIFLTGSSREQLHW
LVRGVTDGITARTGKAEHSTFAFR
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacaatagacaaggtctttcccctgatgaggaaatagtgtatgccgtggtggtt
acctacgaacccgatggccgagttgcggatcttttgcatagtctcactactcaggttgaa
caaataattgttatagataacggttcttcccttgactcgctcgccctattaaaagcggaa
tgttctgctgaaggcgcgctgttaacggaactaaatgaaaacaccgggattgcccatgct
cagaacgtggggataaatcgtgcccttaaagagggagcagattacgttctgctgtttgat
caagactcgctgccccaaccagatatggtttcccgcctcgtatctttttataccgagatg
aacaccaaggcatcagctaagcggcttccccccatcgcagcggtagggccatgcattttg
gatagcaaggggaaaggcagtccacttgtatatgtaaagcggcgttgggctccaggcaag
gcaaagtctacggagcttacgcgcccagctgtgccagtagcattcttactggcttctggg
tgtctaatctccaaagaagcgttgcaaactgtgggtctgatgaacgaaggatatttcatt
gatcatgtagacatggaatggtgtttacgggcagagaaacagggatatcaactgttggtt
agtactggcagcaggctccctcattcttttggggacagtacagtcgcgataccgctactt
aaacggaaggtgcacgtgcatgccccggtacgatcctattacgtagtgcgcaataccatc
gctttatgccgcacttccttgatgccttggcgttggcgtgtccgatatctgctttggctt
attccctatagtgcagtaaatatatttttaactggtagctcgcgagagcagctgcattgg
ctggttcggggagtaacagacgggattactgctcgaactgggaaggcggaacattccacc
tttgcgttccgataa
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