Varibaculum cambriense: CYK25_002225
Help
Entry
CYK25_002225 CDS
T09090
Name
(GenBank) ABC transporter permease
KO
K09690
homopolymeric O-antigen transport system permease protein
Organism
vcb
Varibaculum cambriense
Pathway
vcb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CYK25_002225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcb02000
]
CYK25_002225
Transporters [BR:
vcb02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Homopolymeric O-antigen
CYK25_002225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
Motif
Other DBs
NCBI-ProteinID:
WIK89038
LinkDB
All DBs
Position
complement(493075..493998)
Genome browser
AA seq
307 aa
AA seq
DB search
MHKNSMDLSKDAQQRFRSLADLPLTVTVHHEGFFTGFGSSMLALWNRRKLIKQLAKRELK
SRYKDSVLGYAWTLAKPLVNLLIYYLVIGRILGAERSVPDFAVYVFAGLTLWTFFSTMVN
SATTSIVANAGIVKKVYLPREVFPLSAILASFVDFFSQLAILIIGAGLIAGIPLKYTFTY
GLLSLAVCIVWALACGLFFSAVNVYLRDVQYIVEVLLMLGFWLTPSVYPYTMLASVAPSW
AINIYMLNPTAISSMGFQKAFWAAGDQVTWPPDLTWRLWIMLLVGLVLSFVAQRVFARLQ
GNFAQEL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
ttgcataagaattccatggatttgagcaaggacgcgcagcagcgatttcgctcattagca
gacctgccactcacagttactgtgcaccacgagggattcttcaccggattcggtagctcg
atgttggccttgtggaaccgccgtaagttaatcaagcaacttgcaaaacgagaactcaaa
tctcgctacaaagattcagtgcttggctacgcctggacattagcgaagccactggtaaac
ctactcatttactacttagtgattgggcgtatcttaggggcggaacgttcagtacctgat
ttcgctgtttatgtcttcgcgggactaacgctctggacatttttcagcaccatggttaat
tccgctacaacctccattgttgccaacgctggaattgttaagaaagtatatctaccgcga
gaagtatttcccctatctgcaatcctggcttcttttgtggatttcttttcccaactggca
attttaataattggggcgggactaatagcggggattcccctcaagtacacctttacctat
ggcttgttatctctagcggtatgtatagtgtgggcgctggcctgcggactgtttttttcc
gcagttaacgtatatttgcgggatgttcaatatattgtggaagtactacttatgctggga
ttttggcttacccccagcgtatacccctacaccatgctggcttcagttgccccgagttgg
gcgatcaatatctatatgttgaaccccaccgctatatccagcatgggattccaaaaagcc
ttttgggctgcaggagatcaagtgacctggccaccagatttaacgtggcgcctttggata
atgctactggtcgggctggttttatcctttgttgcccaaagagtatttgctcgcctacag
ggtaactttgcgcaggagctctaa
DBGET
integrated database retrieval system
