Entry |
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Name |
(GenBank) DNA polymerase III subunit delta
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KO |
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Organism |
vcb Varibaculum cambriense
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:vcb00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CYK25_002425
03430 Mismatch repair
CYK25_002425
03440 Homologous recombination
CYK25_002425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:vcb03032]
CYK25_002425
03400 DNA repair and recombination proteins [BR:vcb03400]
CYK25_002425
Enzymes [BR:vcb01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CYK25_002425
DNA replication proteins [BR:vcb03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CYK25_002425
DNA repair and recombination proteins [BR:vcb03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CYK25_002425
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
550309..551292
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AA seq |
327 aa
MAMLKHGLKADELARLHVKYRGADSRPEKLLADRALARLKQLGRNQDPSLAVTEVTASGY
QAGSLDSLTSPSLFGEARLVVIPDFESADEDLGQDLANYLAAPQADCWVVAMHDGSNKGK
RQVDKIKKAGAREVKVARIKNARDKLSLVVEEVRTAGGRIEPAGAQLLVDALGGDLAELI
GAARQLVSDYPQAVTLQGVQQFYGSRVGATGFNVADAAAVGNLSRALVLLRQAFSSGVEP
VAIGGALALKFRNLAKVSARGVSPAQLGMAPWQMEKARREVRGWSDTHLAEAIKIIAQAD
EDAKGASRDPQYALEAAVRKICLLRQS |
NT seq |
984 nt +upstreamnt +downstreamnt
atggcaatgttaaagcatggcctcaaagcagatgagttggcgcgattgcacgttaagtac
cggggtgctgattcgcggcccgagaagctgctggcagatcgcgccctggcacgtttaaaa
cagctggggagaaaccaagatccctcgctagcggtgaccgaggtgactgctagcggctat
caggccggttccctagattccttgacttctccctcattatttggagaagcccgcctggtg
gtgatccccgattttgaatccgccgacgaggatttagggcaagatctggcaaattactta
gccgcgccgcaagcagattgctgggtggttgccatgcacgatggctccaataaaggaaaa
cgccaggtagacaagattaagaaagcgggagcgcgggaggtcaaagtcgcgaggatcaaa
aatgcccgcgacaaactgtccttagtggtcgaagaagttcgcacggcaggcggacgtata
gagcctgccggagcgcagctgctagtagatgcgctcggtggggatttagcggaactaatc
ggcgctgctcgccagttggtctcggactatccgcaggcagtaaccttgcagggcgtgcaa
cagttctacggctcgcgggtgggggctaccggatttaacgtagccgatgccgccgcggtg
gggaatctttcgcgcgccctggtgttgctgcggcaagcattttcttccggggtggagccg
gtcgcgattggaggcgcgcttgccctcaaatttcgcaacctggcaaaagttagcgcccgg
ggagtaagccctgctcagctgggaatggctccttggcagatggaaaaagcgcggagagaa
gtgcgcggatggagtgatacccacctggcggaggcgattaagattattgcgcaagctgat
gaagatgcgaaaggtgctagccgggatccacaatacgcgctggaggcggcagttaggaaa
atctgtcttttgcgtcaaagctga |