Varibaculum cambriense: CYK25_002425
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Entry
CYK25_002425 CDS
T09090
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
vcb
Varibaculum cambriense
Pathway
vcb03030
DNA replication
vcb03430
Mismatch repair
vcb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CYK25_002425
03430 Mismatch repair
CYK25_002425
03440 Homologous recombination
CYK25_002425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcb03032
]
CYK25_002425
03400 DNA repair and recombination proteins [BR:
vcb03400
]
CYK25_002425
Enzymes [BR:
vcb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CYK25_002425
DNA replication proteins [BR:
vcb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CYK25_002425
DNA repair and recombination proteins [BR:
vcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CYK25_002425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
WIK89073
LinkDB
All DBs
Position
550309..551292
Genome browser
AA seq
327 aa
AA seq
DB search
MAMLKHGLKADELARLHVKYRGADSRPEKLLADRALARLKQLGRNQDPSLAVTEVTASGY
QAGSLDSLTSPSLFGEARLVVIPDFESADEDLGQDLANYLAAPQADCWVVAMHDGSNKGK
RQVDKIKKAGAREVKVARIKNARDKLSLVVEEVRTAGGRIEPAGAQLLVDALGGDLAELI
GAARQLVSDYPQAVTLQGVQQFYGSRVGATGFNVADAAAVGNLSRALVLLRQAFSSGVEP
VAIGGALALKFRNLAKVSARGVSPAQLGMAPWQMEKARREVRGWSDTHLAEAIKIIAQAD
EDAKGASRDPQYALEAAVRKICLLRQS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgttaaagcatggcctcaaagcagatgagttggcgcgattgcacgttaagtac
cggggtgctgattcgcggcccgagaagctgctggcagatcgcgccctggcacgtttaaaa
cagctggggagaaaccaagatccctcgctagcggtgaccgaggtgactgctagcggctat
caggccggttccctagattccttgacttctccctcattatttggagaagcccgcctggtg
gtgatccccgattttgaatccgccgacgaggatttagggcaagatctggcaaattactta
gccgcgccgcaagcagattgctgggtggttgccatgcacgatggctccaataaaggaaaa
cgccaggtagacaagattaagaaagcgggagcgcgggaggtcaaagtcgcgaggatcaaa
aatgcccgcgacaaactgtccttagtggtcgaagaagttcgcacggcaggcggacgtata
gagcctgccggagcgcagctgctagtagatgcgctcggtggggatttagcggaactaatc
ggcgctgctcgccagttggtctcggactatccgcaggcagtaaccttgcagggcgtgcaa
cagttctacggctcgcgggtgggggctaccggatttaacgtagccgatgccgccgcggtg
gggaatctttcgcgcgccctggtgttgctgcggcaagcattttcttccggggtggagccg
gtcgcgattggaggcgcgcttgccctcaaatttcgcaacctggcaaaagttagcgcccgg
ggagtaagccctgctcagctgggaatggctccttggcagatggaaaaagcgcggagagaa
gtgcgcggatggagtgatacccacctggcggaggcgattaagattattgcgcaagctgat
gaagatgcgaaaggtgctagccgggatccacaatacgcgctggaggcggcagttaggaaa
atctgtcttttgcgtcaaagctga
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