Varibaculum cambriense: CYK25_002645
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Entry
CYK25_002645 CDS
T09090
Name
(GenBank) SpaA isopeptide-forming pilin-related protein
Organism
vcb
Varibaculum cambriense
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SpaA
Collagen_bind
Motif
Other DBs
NCBI-ProteinID:
WIK89114
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Position
589884..593456
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AA seq
1190 aa
AA seq
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MVALTQGEIIMKSGSTRATGQNRKYRALKLLLPLLAFALLLGFGPQAGVSYAQPEGSADP
VAEQPQPSDPGVANTNPTGNEEQATPENGTNPAQGANPAPQPGPAKEPGTPAKDPADTFD
LTKFLTDDATLSYGGTELKKDKDGNYIVHPDTPYQLKLGFAEQPDGEDDEWQIPSGTELV
YELPTTLQAFPIEKPLQFTIVAQGESVEDNTFWVTKDNKIHIKLSNNKKLTDSSQAKFYV
TLDVKFDKNASKIELNDDLHMDVLISNDPDLSITKSARHDFAAGKVFYTLTVTSIDTNEN
VVVSDQIQGDDTVLHLDQDPKAIKIRSTNKKAPKPGKPQFENNGFTVTIPKMTHGEKVTI
EYSASVDYSKVNPDEAGTKAQTENKANVVSDQIPAPKETINNLEHKLKIGTITKNAGSAE
ETAPKSGIYQQSWTLNVNKYSKLNVAGNTVKDSIPEEFREMMKYSGDGIKIVVNKGKEDA
EGNSIEKTREIKWADVGITDLDTQFEWSYELPGTDPDKFPDTDPENSSYEITYTTEVDVT
KQIVPTSVKNGASSTTPQNPNGSEEVVAPTNGLNPPHIFNVEKKALSANPDEVTWEVAVN
VVPQGYDSLVLTDTLPAAKSGDTSFQDKLKDTKITVEGLIGDEDYTFEPDPENPNKGFTI
EFFKDKKHTEKGLLENNELDDQQKPIERTVKLTFTTTNDQEWVKAYRDGDESLYRHVNRV
KATANGKDRTASAAATPDPEGIHKTFDGIKFKEIGGVDYPVFHYRLRLEGLDQYTGKSFL
ITDKFDSKLLKLVEDPAPNVSGEKKLKIKQQNGEITFQMQTADLPKDSDKVKSVYYLDYS
LIPVSRKALDAINKNPEGLKVSNTATWGPVTTKAVDADYVYGPLTKELTDKPTRSNNYEA
TFKVTINPGGLDIAHGAPTANFKDQMTNLRLQPETLEMTPKDFDYHPVYKDGVLTMEVPN
KQKVVVTYKAKVIGKDLVNYGNEVEVGKEQSKVEGSVAVRMAGGGSAPNPGITIHKHDSR
DLTTQLEGAEFELYEKKDGEFQPVMGKLTPEQAEKEPLRFTTDKNGEVTIRGDKENLKWA
LSVSNKKRQYEYQLKEVKSPKGYKLLEEPLTFTIWEDPADETQQYDGAYLYVANEPEPGT
DIPGKPGKPGNPDGAHKQLGKTGAQVSVAVGAMLVCLAGGYLILRRREQR
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcattaactcagggagagataatcatgaaatcgggttctactcgcgcaacgggg
caaaatcggaaatatcgtgccctcaaactattactacccctactggcttttgcattgctt
ttggggttcggcccgcaagccggagtcagctacgcccagccagaggggagcgctgatccg
gtcgctgaacagccacaacccagtgatcctggtgttgcgaacactaatcccacgggtaat
gaggaacaagctactcccgagaacgggactaatcccgctcagggcgcaaaccccgccccg
caacccggccccgctaaagaaccaggcacgcctgctaaggatccagcagacactttcgac
ctcaccaagttcctaactgatgacgcaacgctgtcctacggtggcaccgaacttaagaaa
gataaggatgggaattatatcgtccacccggacaccccttaccagttgaaactgggattc
gccgagcaacccgatggtgaagatgatgaatggcaaatacctagcggtactgaactagtc
tatgaattgcctaccaccctgcaggctttccccatcgaaaagccgctacagttcaccatc
gtcgctcaaggtgaatccgttgaggacaataccttttgggtgacgaaagataataagatc
catataaagctatctaataacaagaagttaactgactcctcgcaggcaaagttctatgta
actctggatgtgaagttcgataagaatgcctccaagattgagctaaacgatgacctccac
atggacgtgctgatttctaatgatcctgacctgtctatcaccaagagtgcgcggcatgat
ttcgcagccgggaaagtgttctacaccctgacggttacctctatcgacactaacgaaaat
gtggtggtttctgaccagatccaaggtgacgacacggtactgcacctagatcaagatccg
aaggctatcaagattaggtcgacaaacaagaaagcccctaaacctgggaaaccgcagttt
gaaaataacgggtttacggtgaccattcccaagatgactcacggggagaaggtcactatc
gaatattctgccagcgttgattactctaaggtaaacccggacgaggctggcaccaaggct
caaaccgagaataaagccaatgtggtttctgaccagattcctgcccccaaagagaccatt
aataacctggagcataagttaaagattggtactatcaccaagaatgctggctccgccgaa
gaaacggcacctaagtcgggaatctaccagcagtcctggacccttaatgtaaataaatac
tcgaaactgaacgtagcgggcaataccgtcaaagactccattcctgaagagttccgcgaa
atgatgaagtattccggagacggtatcaagatcgtggtgaacaaggggaaagaggacgca
gagggaaactctattgagaaaacccgcgagattaaatgggcagacgttggcatcaccgat
ttggatacacagttcgagtggtcgtacgagttgcccggtactgacccggataaattcccc
gatactgacccagaaaattccagctacgaaatcacctacaccactgaagttgatgtcact
aagcagatcgtgccgacttcggtgaagaacggtgcttccagcactacccctcaaaacccg
aatggttcagaggaagtagttgcccccaccaatggcctcaatcctccccatatttttaac
gttgaaaagaaagctctttccgctaatccagatgaggttacttgggaggtagccgtcaat
gtggtgccgcaaggctatgactccctagtcttgacggataccttgccggcagccaagagt
ggcgatacctctttccaggacaagctgaaagacaccaagatcacggttgaaggcttgatc
ggagacgaagactatacgttcgaaccagaccctgagaaccccaataagggatttaccatt
gagtttttcaaagataaaaagcatacagaaaaaggacttctggaaaataatgaactagac
gatcaacagaagcccatcgagcgcacggtaaaacttacttttactaccaccaatgaccaa
gagtgggtaaaagcctaccgtgatggtgacgagagcctctatcggcacgtcaaccgggtg
aaagccactgccaatggtaaagaccgtaccgcctcggcagcggctaccccggatcctgag
gggatccacaaaaccttcgacggcattaaattcaaggaaatcggtggggttgactatccg
gtgttccactaccggctacgcctggaagggctagatcagtacacagggaaatctttcctg
attactgacaagttcgattctaagctgttaaagctggttgaggatccggcgcccaatgtt
tccggcgaaaagaagctaaagattaaacagcagaacggcgaaattaccttccagatgcag
actgctgatttgccgaaggactcggacaaggtgaaatctgtctattacctggattactcg
ctaattccggttagtcggaaagcgctagatgccatcaataagaacccggaaggcttaaag
gtcagcaacaccgccacttgggggccggtaactaccaaagcggtggatgctgactatgtg
tatggcccgcttaccaaagaactgaccgacaagcctactagaagcaataattatgaggcg
actttcaaggtcactatcaatcccggtggcctagatattgctcacggggcgccgactgcg
aactttaaagaccagatgacaaatctgcgtctgcagccggaaaccttagagatgaccccg
aaggacttcgactatcatccggtctataaggacggggtgctcactatggaagttcccaat
aaacagaaagtagtggtcacctataaagcgaaagtaatcggcaaagacctggttaactac
ggtaacgaggtcgaggtcggaaaggaacagtccaaggttgagggatccgtagccgtacgg
atggctggcggcggtagtgctcccaacccgggaatcactattcacaagcatgattcccgc
gacttgaccactcagctggaaggcgccgagttcgaactctatgagaagaaggacggtgaa
ttccagccggtgatgggcaagcttaccccagagcaggctgagaaagagcccctgcggttt
actaccgataagaatggggaagtcaccattaggggggataaggaaaatctcaaatgggcg
ctgtcggtaagtaacaagaagcgccagtacgagtaccagctgaaagaagtgaagtctcct
aaaggctacaagctgctagaagagccactgactttcacgatatgggaagatcctgcggat
gaaacccaacaatacgatggtgcctacctgtatgtggccaacgagccggaaccgggaacc
gatattccgggtaagccaggcaaacccggcaatccggatggtgcgcataagcagctagga
aagactggcgcgcaagttagcgtagcggtgggcgccatgctggtctgcctcgccggagga
tacctaatcctacgtcgccgcgaacaacggtaa
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