Varibaculum cambriense: CYK25_002940
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Entry
CYK25_002940 CDS
T09090
Name
(GenBank) proline--tRNA ligase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
vcb
Varibaculum cambriense
Pathway
vcb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CYK25_002940
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vcb01007
]
CYK25_002940
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcb03016
]
CYK25_002940
Enzymes [BR:
vcb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
CYK25_002940
Amino acid related enzymes [BR:
vcb01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CYK25_002940
Transfer RNA biogenesis [BR:
vcb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CYK25_002940
Prokaryotic type
CYK25_002940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_edit
MreB-like_C
DUF1198
Motif
Other DBs
NCBI-ProteinID:
WIK89164
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Position
654220..656088
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AA seq
622 aa
AA seq
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MAYNMSTYFVRTLREDPVDAEVDSHKLLVRAGYIRRAAPGIYTWTPLGLRTIRRVEQVVR
EEMDRIGALEVAFPALLPREPYEATNRWEEFGPSLFKLQDRKGADYLLAPTHEEMFTLLV
KDFYSSYKDLPVVLYQIKEKYRDEARPRAGLIRGREFIMKDAYSFNIDDEGLEASYQEQR
RAYQRIYSRLGLDFVICSAMAGAMGGSRSEEFIFPCAIGEDTFVRSEGGYAANVEAVTTI
APEPQDYSQVPAAIERKTPGAHTIEALVDYSNEHFPREDGRSWNKADTLKAFMVAATYAD
GKREVLLLGVPGDREIDMRRLEASLGADVEMATPEDMAAYPNIVPGFTGPTCAGPDHPDR
KVDEDGNISGSPRCLLDPRVVEGTEWIAGAGKEDTHIYHLVAGRDFRADGFIEAAEVRDG
DPAPDGSGALQTARGIEIGHIFALGTKYSEALGLNVLDQNGKSQVVTMGSYGIGVSRVMA
AIAEEYHDEVGLKWPTNVAPFQVHVLVTGKGAELFEAAQKLGDQLTAAGIDTLIDDRKKV
SAGVKFKDAELLGMPWLIVIGRGLKDGTVEVRCRATGERREIPVADAFQYVSDQVRKDLA
EAYARAEKIVPAAAAVAGGEEE
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
gtggcttacaatatgtcgacttattttgtcaggactttgcgggaagacccggtagatgct
gaggtggattcccataaactgctggtgcgcgccggttatattcgccgcgccgcgcccggg
atctacacttggacacctctggggctgcgtacgattcgccgcgtagagcaggtggtacgc
gaagaaatggatcggattggggcgctcgaggtggctttcccagcgctgctgccgcgcgaa
ccctatgaagcgaccaaccgttgggaagagttcggtccttctctgtttaagctgcaggat
cgcaagggcgctgactatctgttggcgcccactcacgaagaaatgttcactctgctggtg
aaagacttttattcttcctacaaggatttgccagtcgtcctctaccagattaaggaaaag
tatcgggacgaggcgcgcccgcgggcaggcctgattcgcggacgcgaattcattatgaag
gacgcctactccttcaatatcgatgatgaaggcttagaagcctcctaccaagagcagcgc
cgcgcctatcagcggatttactcgcggctggggctagatttcgtgatttgttccgcgatg
gcaggcgctatgggaggctcccgctcggaagagtttattttcccctgcgctatcggggaa
gatactttcgtacgctctgagggcggttatgcggccaacgtagaagcggtaactaccatt
gcgccggagccgcaagattattcgcaggttccggcggcaattgaacgtaagactcctggt
gcacacactattgaagcgctggtggattactccaatgagcatttcccgcgcgaagatggt
cggtcgtggaataaagctgacactttgaaagcctttatggtggccgccacctatgcggat
ggcaaacgggaagtgctgctgctgggagtacctggggatcgcgagattgatatgcgccgc
ctagaagcttcgctaggggcagatgtagagatggccaccccggaagatatggccgcttat
cccaatatcgtaccgggctttaccggtcccacctgcgctgggcctgaccatccggatcgg
aaagtagacgaggacgggaatatctccggcagtccccgctgtctcctagacccgcgagta
gtggaaggtaccgaatggatcgccggtgccggcaaagaagacactcacatttatcacctg
gtggccggaagagatttccgcgcggacggctttattgaagccgccgaagtgcgggacggg
gatccggcgcctgatggttccggagccttgcagaccgctcgcgggatcgaaatcgggcac
atattcgccctcggaacgaagtattccgaagcgctgggactaaacgtgctagatcaaaac
ggaaaatcccaggtagtaaccatgggctcctacgggatcggggtttcccgggtaatggct
gctattgccgaggaatatcacgatgaggtggggctcaaatggcccactaatgtggcgccc
ttccaagtgcacgtgttggttactggtaagggggcagaacttttcgaggccgcgcaaaag
ctgggagatcagctcaccgccgccgggatcgatactttgattgatgaccgcaagaaagta
tctgccggggtgaagttcaaggacgcggaactgctaggcatgccctggctgatagtaatc
gggcgcgggctcaaagatggaaccgtggaggtgcgttgccgtgccactggtgagcggcgc
gaaatcccagttgctgatgccttccagtatgtaagtgaccaggtgcgcaaggatcttgcg
gaagcgtatgcgcgggcagaaaaaatcgttccggcagctgcggcggtagcgggcggcgag
gaggaataa
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