Varibaculum cambriense: CYK25_003040
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Entry
CYK25_003040 CDS
T09090
Symbol
cydD
Name
(GenBank) thiol reductant ABC exporter subunit CydD
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
vcb
Varibaculum cambriense
Pathway
vcb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CYK25_003040 (cydD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcb02000
]
CYK25_003040 (cydD)
Transporters [BR:
vcb02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
CYK25_003040 (cydD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
MobB
CbiA
AAA_16
AAA_22
RsgA_GTPase
DUF87
AAA_30
AAA_11
DO-GTPase1
nSTAND3
AAA_29
TrwB_AAD_bind
Astro_1A
Motif
Other DBs
NCBI-ProteinID:
WIK89181
LinkDB
All DBs
Position
complement(675042..676823)
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AA seq
593 aa
AA seq
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MKPLDPKLLKYARSARLAIAITAVTGIMQAGLVIAQCFLIAALISPVISLRQSWDQVAHY
AFWLAIVSLARVGLTYFRSNHQHKAAKKAIRELRSQVLAHCLKLGPRWLARKGTDTVTLA
TRGLEKLGPYFVDYIPQLILAVTVTPLVLVVMAVLDFWSALVAIITIPLIPIFMVIIGLM
TQTASDRRLATMQHLGRQLLDLIAGLATLKSLGRHRGPEKQISSIGKTYTQTTMATLRIA
FLSGAVLEFISILSVAIVAVTVGLRMVAGGLDLYTGLIAIMLAPEVYAPVREVGKFFHAS
ADGLAASQSAFEILETPPATGGEQPAPNLKETTITITDLGMRSRGAWAPNAVNMVIKPAT
ITALVGKSGEGKTTTVMALLKQLSGDRGKITLTDTSGKTVDLAEVSPDSWWQQTSWLPQM
PLLLPGTLAQNVAESPAHLKELFPHGEPGEQVEQAANLAGFAEVVAKLPEGWNTFLRAGG
EGLSVGQRQRLALVRALLSTKQLIALDEPSAHLDAHLVAQVAQVVQQLKDAGKTLVLIAH
RKELAQIADQVVRISSVPFTAEEAEEYRDSEPQAAIASEAEIPEFLGSTRGLE
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccacttgatccgaaactgctgaaatatgcccggtcagcgcgtctagccatcgcc
atcaccgcagtcaccggcattatgcaagcaggattagttatcgcccaatgctttctgatt
gctgccttgatttctccggttatctctttgcgccagtcctgggatcaggtagctcactac
gctttttggttggccatcgtgtcgctggcgcgggtaggtctgacctatttccgttccaac
caccagcataaggcggctaagaaggcgattcgcgaactgcgttcccaagtgcttgctcac
tgtctgaaactggggccgcgctggctggcacgtaaaggtaccgacacggtcaccttagct
acccgcggcttggaaaagcttggcccctatttcgtggactatatcccgcagctgatcttg
gcagttacggtcactcccctggttttagtggtcatggcggtgctggatttttggtcagca
ctggtggcgataattactattcccttgataccgatatttatggtgatcatcgggctaatg
acccaaactgcttcggatcgccgcctggccacaatgcagcatttagggcggcagctactg
gatcttattgccggtcttgccactttgaagagcctaggcaggcaccgtggccccgaaaaa
cagatttcttccatcggcaaaacctatacccaaaccacgatggcgactttacggatcgcg
ttcctatcgggtgctgtcttggagttcatctcgattctttcggtagccatcgtggcggtt
accgtgggcttgcggatggtggctggaggcctcgatctctacaccggattaatagcgatt
atgctggctcccgaggtatatgcaccggtacgcgaggttggtaaattcttccacgcttcc
gctgatggacttgcggcttcgcaatcggcttttgaaattttggaaactcccccggctact
gggggcgagcagccggctcctaacttaaaagaaaccactattactatcacggatctgggg
atgcgttcgcggggcgcttgggcgcccaatgccgtaaatatggtgattaaaccagctacg
attaccgccttagtgggcaaatcgggcgaaggtaaaaccactaccgtgatggcgttatta
aaacagctctctggtgatcgcggaaagattacccttaccgatacctccggtaaaaccgtg
gatttagcggaggtttctccggattcttggtggcagcaaacttcttggcttccccagatg
ccactacttttgccgggaactttagcccaaaatgttgcggagagccccgcccatctgaag
gaattatttccgcatggagaacctggcgagcaggtggaacaagctgctaatctcgccggt
tttgccgaggtagtcgcgaaactaccagaaggctggaatactttcttacgcgcaggcggg
gaaggtctttcagttggccaacgccaacgtctggctctggtacgcgccctgctgtctaca
aaacaattaattgctctcgatgaaccttctgcccacctagatgcgcatttggttgcccag
gtcgcccaagttgtccagcagctaaaggatgcgggaaaaaccttagttttaattgctcac
cgcaaagaacttgcccagatcgcagaccaggtagtgcggatttcctcggtgccctttacc
gctgaggaggccgaggaatatcgcgatagcgagccgcaggcagccatagccagtgaggcg
gagattcctgaattcttaggttcgacccgggggttggaataa
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