Varibaculum cambriense: CYK25_003345
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Entry
CYK25_003345 CDS
T09090
Symbol
dxs
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
vcb
Varibaculum cambriense
Pathway
vcb00730
Thiamine metabolism
vcb00900
Terpenoid backbone biosynthesis
vcb01100
Metabolic pathways
vcb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CYK25_003345 (dxs)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CYK25_003345 (dxs)
Enzymes [BR:
vcb01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
CYK25_003345 (dxs)
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Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
PFOR_II
TPP_enzyme_C
Motif
Other DBs
NCBI-ProteinID:
WIK89230
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Position
741215..743086
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AA seq
623 aa
AA seq
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MAKILDRINNPADLQKLSSLELADLAGEIRSFLVENVAKTGGHMGPNLGVVELTIAVHRM
FSSPTDTIIFDTGHQAYVHKILTGRKNFANLRTAQGLSGYPSRAESVHDVVENSHASTAL
SWAQGVAEAKALRGDRSYTVAVIGDGAMTGGMTWEALNNISERPDLRLIIVVNDNGRSYE
PTIGGLAHHLDALRTSPTYERALRWGKQHLKSRGKPGELTYDALHGIKRGMADIVSPEQV
MFSDLGIKYTGPVDGHDIVATEFQLARAKEFTGPIIVHVITEKGRGYTPAEENDADHFHT
VGPIHPETGLPVKKERFGWTSVFAEEIVQLAKRNPKIVGISAAMMEPVGLKPLRAQFPQR
VFDVGIAEQHAMTMAAGLSYAGCHPVIALYATFLNRAFDQLLMDAALHKQGITVVLDRAG
ITGADGASHNGMWDLAIAAMIPGIRVAAPRDASTLRKLLGQAVSIEDGPTIVRYPKGSVP
PDIRAEETADGLEVLFHSSGKGKNILVVAVGAMAGQAIALSKELAARGQAVKCVDPGWVI
PIPPALLKQVAAADLVVTIEDGEVTNGVGALLRTTCAAKNCFTPIKSFGIPQMFLPTDSR
DNLLESSQMTPSEMLKELAELLD
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaatactcgatcggataaataacccggcagatttgcagaagctctctagtctg
gagctggcggatctggccggtgagatccggtcattcctggtcgagaacgtggcgaaaacc
ggggggcatatggggcccaacctgggggtagtggaacttactatcgccgtccaccgcatg
ttttcttcccctactgacaccattatttttgatactgggcatcaggcctatgttcataag
atcctgacgggacgtaaaaattttgcgaatcttcgcacggcgcaggggctctctggttat
ccttcgcgggcggaatcagtacacgacgtggtagaaaactcccatgcttcgaccgcatta
tcttgggcgcagggagtagcggaagcaaaggctttaagaggagatcgttcctatacggta
gcagtcatcggagatggcgccatgaccgggggaatgacttgggaagctttgaataacatt
tctgaacgtcccgatctccgcctgattattgtggttaacgacaacgggcgttcctatgaa
cccacaatcgggggattagctcatcacctggatgcactacgtacttctcccacctatgaa
cgggcattacgttggggaaaacagcatctgaagtctcgcggcaagcccggtgaactcacc
tatgatgcgctgcacggaatcaaacgggggatggccgacatagtttctcctgaacaagtg
atgttttccgacctcgggattaaatataccggcccagtcgacgggcatgacattgtagcc
accgagtttcagcttgcccgggcgaaagaatttaccggtcccatcattgtgcatgtcatt
acggagaagggacgcggatatacgcctgcggaagaaaatgatgcggatcatttccatacc
gtaggtccgattcatcccgaaactggtttgccggtaaaaaaggaacgcttcgggtggaca
tccgtatttgcggaagaaattgtgcaactggcaaagcgcaaccccaagattgtggggata
tcggcggcaatgatggagccggtagggctaaaaccgctgcgagctcagttcccgcagcga
gtatttgatgtgggaatcgcggaacaacacgcgatgactatggctgccggtctttcctat
gccgggtgccacccagtcattgctctttacgctacctttttaaaccgcgcttttgaccag
ctgttaatggatgctgccctacataaacaggggataaccgtggttcttgatcgcgccggt
atcaccggagctgatggagccagtcataacgggatgtgggatctggcgatcgcggctatg
atccccggaattagagtggccgcgccgcgggacgccagcaccttgcgcaagctattaggg
caggcagtttcgatcgaagatggtcccactattgtgcgctatcccaaaggcagcgtgccc
cccgatattagagcagaagaaaccgcagacggcctcgaggttttattccacagttccggg
aaggggaaaaatattctggtggtggcggtgggcgctatggccgggcaggcgatcgccctt
tctaaagaacttgccgcgcgcgggcaggcggtcaagtgtgtagatcccgggtgggtaata
cccattcctcccgcgcttttaaagcaggtggctgccgccgatttagtggtcactatcgag
gacggggaagtaaccaatggggtaggagctttgctgcgtaccacttgtgcggctaaaaat
tgtttcaccccgattaagtcttttggaattccccagatgttcttacctacagattcgcgc
gataacttgctggaaagctcgcagatgacgccctcggagatgttaaaggaactagcggag
ctgctagactaa
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