Varibaculum cambriense: CYK25_004180
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Entry
CYK25_004180 CDS
T09090
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
vcb
Varibaculum cambriense
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcb03036
]
CYK25_004180 (xerD)
Chromosome and associated proteins [BR:
vcb03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
CYK25_004180 (xerD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Motif
Other DBs
NCBI-ProteinID:
WIK89369
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All DBs
Position
899787..900740
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AA seq
317 aa
AA seq
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MDEIEQASGAYLDHLAIERGLSNNTVGSYRRDLARYHEYLVGAGVHSLAEITPETLRAFL
QAAAAGEDGKNPLAASSIARLMASLRGFHGFMLNERLSSTDPTESLENPRLARPLPKALS
ITQTRVLLEAFSGEDPASLRSRALLETLYASGARVSEVCALDVDDLGVLAGSEAEDSEEN
PITLVTVTGKGNKQRLVPLGEYAVKALEAYLVRARPQLAQKGRGSSALFLNLRGGRLSRQ
SAWNIIREAAEKAGIKTPVSPHSLRHSFATHMLEGGADVRVVQELLGHVNVTTTQIYTKV
TATLLREVYQETHPRAR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaatcgagcaggcgagcggggcatatctagatcacctggcgattgaacgcgga
ctatcaaataacactgtcggctcctaccggcgtgacttggcgcgttaccacgaatattta
gtcggtgctggtgttcattctctagcggaaatcacccccgaaactttgcgggcgttcttg
caggcagccgcagccggagaagacgggaaaaacccgttggcggcctcttcaattgcgcgg
ctaatggcctctctgcgcggattccacggctttatgttaaacgaacgattgagtagcact
gaccccaccgagagcctagaaaatccccgcctagcgcgaccgcttcccaaagcactcagc
atcacccagactcgcgtcctgctggaagcttttagcggggaagaccccgcttctttgcgc
tcgcgagcactgctggagaccttgtatgcgtcgggagcccgggtgagtgaggtgtgcgcc
ctagacgtggatgatttaggagttttagctggtagtgaggcagaggattcggaagaaaac
ccgattaccctagttaccgtaaccggaaaaggcaacaagcaacggctagtaccgctaggg
gaatacgcagtcaaggccttagaagcgtatttggtacgcgcccgcccacagcttgcgcaa
aaaggccggggtagttccgcgctgttcttgaatctgcggggagggcgtctaagccggcaa
agcgcctggaatattattcgcgaggccgcggaaaaagcggggataaaaacaccggtttca
ccccacagcctgcggcattccttcgccacccatatgttagagggcggagcggacgttagg
gtagtgcaagagctgctcggtcacgtgaacgtaaccaccacccagatctataccaaggtc
accgcgactttgttgcgcgaggtgtaccaagagacccatccgcgtgcccggtag
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