Varibaculum cambriense: CYK25_004235
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Entry
CYK25_004235 CDS
T09090
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
vcb
Varibaculum cambriense
Pathway
vcb03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CYK25_004235 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
vcb03011
]
CYK25_004235 (rpsA)
Ribosome [BR:
vcb03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
CYK25_004235 (rpsA)
Bacteria
CYK25_004235 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
S1_2
TOBE_3
Motif
Other DBs
NCBI-ProteinID:
WIK89378
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All DBs
Position
911769..913226
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AA seq
485 aa
AA seq
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MTTSTEQLDQVAVNDIGSQEELLAAIDKTIKYFGDGDIVTGTVVRVDRDEVLLDIGYKTE
GVILSRELSIKHDVSPEDVVQVGDEIEALVLQKEDKEGRLLLSKKRAQYERAWGDVQKVK
EADGVVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLAPYIGRELEAKIIELDENR
NNVVLSRRAWLEQTQAEVRTQFLDTLQKGQIRSGVVSSIVNFGAFVDLGGVDGLVHVSEL
SWKHIDHPSEVVEVGQEVSVEVLDVDMDRERVSLSLKATQEDPWQTFARTHAIGQVVPGK
VTKLVPFGAFVRVEDGIEGLVHISELAQRHVEVPEQVVKVGEEVFVKVIDIDLDRRRISL
SLKQANEGVDPNTTEFDPSLYGMTAEYDEEGNYKYPEGFDPETNEWMEGYEAQREAWEEE
YAQAEARWKAHKEQVAKALEADTEAAATRPDPAENASYSTESEDSTGTLASDEALAALRE
KLTGE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaccacctctactgagcagctggatcaagttgccgtaaacgatatcggttcacaagaa
gaactacttgctgcaatcgataaaactattaagtactttggcgatggcgacatcgttacc
ggtactgtcgtgcgggtcgaccgcgatgaagtcctcctcgatattggttataaaaccgag
ggcgttatcctctcccgcgaactatccatcaaacatgatgtgagtcccgaagacgttgtc
caggtgggcgacgaaatcgaagccctggtattgcagaaggaagataaggaggggcgctta
ctgctttcgaagaagcgtgcccaatacgagcgtgcctggggcgacgtccagaaggtcaag
gaagccgatggcgtggtcaccggtaccgtgatcgaggtggtcaagggcggcctgattttg
gatatcggtctgcgtggtttcttgccggcttcgctggtagagatgcgccgggtacgcgac
ctcgctccctatattggtcgcgagctcgaagccaagattattgaactggatgagaaccgc
aataacgtggtgctttcccgtcgtgcctggttggagcaaacccaggcggaggtacgtacc
cagttcctggataccttgcaaaagggtcagattcgttccggcgtggtttcttccatcgtc
aacttcggtgcgttcgtggacttgggcggagtagacggcctggtgcacgtatccgaactt
tcttggaagcatatcgatcacccctccgaagtggtggaagttggccaggaagtttcggtc
gaggtactggatgtggatatggatcgcgaacgggtttcgctgtccttgaaagccacccag
gaagatccttggcagaccttcgcgcgcacccacgctatcggccaagtggtgccgggcaag
gtaaccaagctggttcccttcggcgcgtttgtgcgggtcgaggacgggatcgaaggcttg
gtacatatctctgaactggcgcagcgtcacgtagaggtaccggaacaggtcgttaaagtc
ggcgaagaagtattcgttaaggttatcgatattgatctggatcgccgccgcatttcgctg
tcgctcaagcaggcgaatgaaggcgttgaccccaataccaccgagtttgatccttcgctt
tacggcatgaccgccgaatacgacgaagaaggcaactacaagtaccccgaaggcttcgat
ccggaaaccaatgagtggatggaaggctacgaggcgcagcgggaagcttgggaagaagaa
tacgcccaggcagaagcccggtggaaggctcacaaggagcaggtggctaaggctctggaa
gccgatacggaagccgccgctacccgtccggatcccgcagagaacgctagctactccacc
gagagtgaagactcgaccggtactttggcttctgatgaagctctagctgctctccgcgag
aagctaactggcgagtaa
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