Varibaculum cambriense: CYK25_004355
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Entry
CYK25_004355 CDS
T09090
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K03072
preprotein translocase subunit SecD
Organism
vcb
Varibaculum cambriense
Pathway
vcb03060
Protein export
vcb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CYK25_004355 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CYK25_004355 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vcb02044
]
CYK25_004355 (secD)
Secretion system [BR:
vcb02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CYK25_004355 (secD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecDF_P1_head
SecD_1st
SecD_SecF_C
MMPL
EF-hand_5
Motif
Other DBs
NCBI-ProteinID:
WIK89399
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Position
934244..936127
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AA seq
627 aa
AA seq
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MAKKKYHAGRTLAFFLVLVLALTGTLLVGVLTKKAKPTPSLALDLEGGTQLILTPKGNAA
SGAKRAVTAEDITQAIEVIRQRVDASGVSEAEITSQGNSNILVSLPGNPSKETLDLVRQS
AELYFRAVLRSAPGVPQSVMAQQAEQQQAGKKQAKPANIDPEAFAKQMADLDHDGKISDK
RATQPKDNSDDAWITEKVLQEFYAKDCQQKSSREGGSSGDIKKPLVACSSEGHEKYILSP
AEVSGARITSAESGMGTGASGQSTGQWIVTLSFDKQGASTFADITTRMMKYRHQPVAGEN
GLPPGQNNDKNRFAIVLDGLVVSAPGVNNAITNGKAEISGSFTRSSSTALANQLKFGSLP
LNFDVQSEQQVSATLGADQLRYGVIAGIIGLILVVFYLIWQYRGLAIVAVGSLVSAGVLL
YLTLTLLSWSMGYRLSLAGIAGVIVSIGTTADSFIIYFERIRDEVRDGKALSSAVSVGWD
RAKRTIVTSDLVNVLAACVLYFLAVGGVQGFAFTLGITTLIDLALIFIFTHPMMVWLLRF
KFFGEGHKLSGLDPEHLGAQRGTYRYVGAGQVRKIRSVYKSKPEEDAGKSDNDKAEEPAA
EKADSNEDDAPADELASVSATDQEEEK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
ttggcgaagaaaaaatatcacgctggacgcacactggcgtttttcctggtacttgtgctg
gctttaacgggaaccctgctggtgggggtactcactaagaaagctaaacccaccccctct
ttggctctggatttggagggcggaactcagctgatcctcaccccgaaaggtaatgctgct
tccggagctaaacgcgcagttaccgctgaggatattacccaggcgattgaggttattagg
cagcgtgtcgacgcttccggggtttcggaagcggaaatcacctcccagggtaactccaat
attttggtgtccttacccggtaacccttccaaagaaactttggatttggtgcgccagtct
gccgagttgtatttccgggcggtattgcgttctgccccgggggttccccagtcggtgatg
gctcagcaggcagagcaacaacaagcaggcaagaaacaggcgaaaccggccaatattgat
ccggaagctttcgctaagcaaatggcggatcttgaccatgacggcaagatcagtgataag
cgagccacccagccgaaagataattccgacgatgcctggataaccgaaaaagttctgcaa
gagttctatgccaaagattgtcagcaaaagagctcgcgggagggcggctcctccggtgat
attaagaaaccattggtagcctgctctagcgaagggcacgagaagtatattttgtctcct
gccgaggtttcgggtgcccggataacttctgcagaatcgggcatgggtaccggggcttcc
ggacaatccactggtcaatggatagtgactctttcctttgataagcagggggcttccaca
ttcgcggatatcaccacccggatgatgaagtaccgccatcaaccggttgcgggagaaaat
ggcttgccaccggggcaaaataacgataagaaccggtttgcgatcgtactcgatggcttg
gtagtttccgcgccgggagtaaataacgcgatcactaacggtaaagcggaaatttctggg
tctttcacccggtcttcttccaccgctctggctaaccagttgaagtttggttcgctgccg
ctcaacttcgatgtgcaatccgaacagcaggtttcggcaactctcggtgctgaccagcta
cgatatggggttatcgccggtatcatcggtttgattctggtggtgttctacctgatttgg
cagtaccgtggcctagcgatagtagctgttggctccctggtgagtgccggcgtgctcctc
tacctgaccttgactttattgtcctggtcgatgggctatcgcctctccctagcgggtatt
gcgggcgtgatcgtttctatcgggactaccgccgactccttcattatttacttcgagagg
attcgcgacgaggttcgcgacggcaaagccttatcgagcgcggtcagcgttggttgggat
cgggcaaaacgcactatcgttacctccgacttggtgaacgtgctagcggcttgcgtgctc
tacttcctggcagtgggcggggtgcaaggcttcgccttcaccctcgggatcaccaccttg
atcgacttggcgctaatcttcatcttcactcacccgatgatggtgtggttactgcggttt
aagttcttcggggaaggacataagctctccggcctcgatccagagcacctgggtgcacag
cgcggaacctaccggtatgtaggcgcgggacaagtacgcaagattcgctctgtctacaaa
tctaagccggaagaggacgccggaaagtcagataatgacaaagctgaggagccagccgcg
gaaaaagcggattcgaacgaggatgatgctcccgcagatgagctagcgtcagtatccgcg
acggaccaggaggaagaaaaatga
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